Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00418 ATGGTCGATGTCTCTGATTCAGAACATAGGCATTTTCGACGGCTAATTACTGCTCCTATTGTTGGTCACAATGCATTAGATATGTACTTAGAACGTCTTGAGGACATTATGATCAATTCTTTAGAGGAATTGTCTAGCATGAAACACCCTATTGAGTTCTTGAACGAGATGAAGAAGGTTTCCTTTAAAATCATTGTTAATGTTTTCATGGGATCTTCTAGTGAGAACATTATTAAAAAGATTGGAAGTTTATTTACTGACTTGTGTAATGGCATGCTTTCCATCCCCCTCAATGCACCTGGTTTTACATTCCACAAAGCACTCAAGGCACACAAAAAGATAGCCCAAATAGTTCAACCCGTTGTGGATGAAAGGAGGTTGACGAAAAAGAATGGTGAACATATGAGAGAGAAAAAAGATCTTATTGATATTCTATTGGAAATCAAAGATGAGAATGGTAGAAAATTGGAGGATGAAGATATTAGTGACTTATTATGGAAAAAGCAAAGACCAGAATCAGTTCCTCCACTGACAGTGAAGCTCAAACAATTTGCAGAAGATCTACTTGAGATTATCAATGAAGTGTTCCGATGTGCCAACATTGTCTTTTCAACTTTTCGAGAGGCAACATCTGATATAAACATCAATGGTTATCTCATACCAAAAGGATGGAGAGTGATGCTATGGTCGAGTGCTATTCATATGGATTCAAAATATTATCCAAATGCAGAAGAATTCAATCCATCAAGATGGAATGATTACACTGCTAAGGTAGGAACCTTCCTTCCTTTTGGAGCAGGAAAAGTAGGCTTTGTCCTGGAGCAGACTTGGTGA 834 0.3741 MVDVSDSEHRHFRRLITAPIVGHNALDMYLERLEDIMINSLEELSSMKHPIEFLNEMKKVSFKIIVNVFMGSSSENIIKKIGSLFTDLCNGMLSIPLNAPGFTFHKALKAHKKIAQIVQPVVDERRLTKKNGEHMREKKDLIDILLEIKDENGRKLEDEDISDLLWKKQRPESVPPLTVKLKQFAEDLLEIINEVFRCANIVFSTFREATSDININGYLIPKGWRVMLWSSAIHMDSKYYPNAEEFNPSRWNDYTAKVGTFLPFGAGKVGFVLEQTW 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00418 277 Gene3D Cytochrome P450 1 166 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00418 277 Gene3D Cytochrome P450 169 271 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00418 277 PRINTS B-class P450 signature 4 15 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00418 277 PRINTS B-class P450 signature 235 250 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00418 277 PRINTS B-class P450 signature 207 234 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00418 277 Pfam Cytochrome P450 7 163 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00418 277 Pfam Cytochrome P450 190 268 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00418 277 SUPERFAMILY Cytochrome P450 4 267 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00418 277 PANTHER CYTOCHROME P450 26 190 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00418 Trre-Chr16 3083580 3087864 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00418 2 267 Cytochrome P450 AT2G32440 35.974 3.58e-64 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00418 K04123 - ag:BAG68929 375.941