Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00417 ATGGAAATGCAGTGGGTTTACATTTCTATAGCCACTTTGTTGGCATGCTACGTTTTTGTTAACAAATTTGTAAGGAATTTTAATGGATGGTATTATCATCTAAAACTAAGAAACAAAGAGTACCCTTTGCCTCCTGGTGATATGGGATGGCCTCTTATTGGCAATCTATTATCATTCTACAAAGATTTCTCTTCTGGCCAACCTAATTCATTCATTACCAACCTTTTTCTCAAATATGGAAAAAACGGCATCTACAAAACCCACTTGTTTGGAAATCCTAGTATAATCATGTGTGAGCCAGAGATGTGTAGACAAGTGCTTTCCGACGATGAGAACTTTAAGTTTGGATATCCAAAAGCAATCAAAGAGTTGAACAAATGTAGACCCATGATAAATGTCTCTGATTCTGAACATAGACGTTTTCGACGCCAAATTACTGCTCCAATTGTTGGTCAAAATACTTTAGCAGTGTACATAGAACGTATTGAGGACACTGTGATAAATTCTTTAGAGGAATTGTCTAGCATGAAACACCCTATTGAGCTCTTGAAAGAGATGAAGAAGGTTTCCTTTAAAACCATTGTCCATGTTTTCATGGGTTCTTCTAATGAGAACATTATTAAAAACATTGGAAGTTCATTTACTGATTTGTATAATGGCATGATGTCTATCCCATTCAATGCACCTGGTTTTACATACCACAAAGCACTCAAGTCACGCAAGAAGATAGCCAAAATACTTCAACCCATTGTGGATGAAAGGAAGTTGATGATAAAAAATGGTGAACATGTAGAAGGGAGAAAAGATTTTATGAATATTCTCTTGCAAATCAAAGATGCGAATGGTAGAAAATTGGAGGATGAAGATATTAGTGACTTACTAATTGGACTTTTATTTGCTGGACATGAAAGTACAGGAATTGGGCTAATGTGGTCGATTATATATCTTACAAAATATCCACATATCATGAAAAAAGCCAAGGAAGAGCAAGAAGAAATCTTGAGGGCAAGACCAGACTCGCAGAAGCGATTGAATCTTAATGAAATCAAGAAAATGATTTATCTTTCACAGGTAATCAATGAAATGTTGCGATGTGCCAACATTGGCTTTTCAACTTTTCGAGAAGCAACATCTGACATCAACATCAATGGTTACCTCATACCAAAAGGATGGAGAGTGCTAATATGGGCGAGAGCAATTCATATGAATTCTACATATTATCCAAATGCAGAAGAATTCAATCCATCAAGATGGAATGATTACACTGCGAAGGCAGGGACCTTCATTCCATTTGGAGCAGGAAGTAGGCTCTGCCCTGGAGCGGACTTAGTCAAACTTGAAATTTCTATATTTCTTCATTATTTCCTCCTTAATTACAGGTTGGAGCGAATAAATCCAGATTGTCCTGTTACAAGCTTGCCAGTATCTAAACCCACTGACAATTGTCTAGCTAAGGTGATAAAGATACCATGTGCCTAG 1479 0.3678 MEMQWVYISIATLLACYVFVNKFVRNFNGWYYHLKLRNKEYPLPPGDMGWPLIGNLLSFYKDFSSGQPNSFITNLFLKYGKNGIYKTHLFGNPSIIMCEPEMCRQVLSDDENFKFGYPKAIKELNKCRPMINVSDSEHRRFRRQITAPIVGQNTLAVYIERIEDTVINSLEELSSMKHPIELLKEMKKVSFKTIVHVFMGSSNENIIKNIGSSFTDLYNGMMSIPFNAPGFTYHKALKSRKKIAKILQPIVDERKLMIKNGEHVEGRKDFMNILLQIKDANGRKLEDEDISDLLIGLLFAGHESTGIGLMWSIIYLTKYPHIMKKAKEEQEEILRARPDSQKRLNLNEIKKMIYLSQVINEMLRCANIGFSTFREATSDININGYLIPKGWRVLIWARAIHMNSTYYPNAEEFNPSRWNDYTAKAGTFIPFGAGSRLCPGADLVKLEISIFLHYFLLNYRLERINPDCPVTSLPVSKPTDNCLAKVIKIPCA 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00417 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Trre16g00417 492 Pfam Cytochrome P450 44 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00417 492 CDD CYP90-like 77 486 - -
Trre16g00417 492 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00417 492 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00417 492 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00417 492 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00417 492 PRINTS E-class P450 group IV signature 385 399 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00417 492 PRINTS E-class P450 group IV signature 422 438 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00417 492 PRINTS E-class P450 group IV signature 438 456 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00417 492 PRINTS E-class P450 group IV signature 291 317 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00417 492 PRINTS E-class P450 group IV signature 352 368 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00417 492 Gene3D Cytochrome P450 34 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00417 492 SUPERFAMILY Cytochrome P450 38 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00417 492 PANTHER CYTOCHROME P450 26 39 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00417 Trre-Chr16 3071284 3075627 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00417 13 488 Cytochrome P450 AT2G32440 47.589 3.99e-166 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00417 K04123 - ag:BAG68929 810.061