Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00416 ATGAAATTTCAATGGTTTTTGATATCTGCTGCCACTTTGTTGGCATGTTACATTTTTGTTAACAAAGTTGTGAGGAATTTGAATGATTGGTATTATAATCTTAAGTTGAGAAATAGACAATATCCACTACCTCCTGGTGACATGGGGTGGCCTTTAATTGGAAATCTTTGGCACTTCTTCAAAGGTTTCTCATCTGGTAACCGTGAGCTATTCATCAACAACATTTTTCTCAGATATGGACGAACCGGTATCTACAAGACTCACTTGTATGGTTGTCCAAGCATTATTGTCACTACACCTGATATGTGCAAGAAAGTCCTAAATGATGAGGTGACCTTTAAACTTGGTTATCCAAAAGCCGTCACTGTACTAGCATCAAATAGGGTACTAAGTAGCGAACATGGACGCCTAAAACGATTAGTCACGGCTCCTATTGCCGGTTACAATGTATCAACAATGTACCTAGAGCGTATCGAAGATATTGTGATCAACAAGCTAGAAGAACTATCTAGCATGAAACACTGA 525 0.3848 MKFQWFLISAATLLACYIFVNKVVRNLNDWYYNLKLRNRQYPLPPGDMGWPLIGNLWHFFKGFSSGNRELFINNIFLRYGRTGIYKTHLYGCPSIIVTTPDMCKKVLNDEVTFKLGYPKAVTVLASNRVLSSEHGRLKRLVTAPIAGYNVSTMYLERIEDIVINKLEELSSMKH 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00416 174 Gene3D Cytochrome P450 33 174 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00416 174 SUPERFAMILY Cytochrome P450 41 170 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00416 174 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Trre16g00416 174 PANTHER CYTOCHROME P450 26 40 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00416 Trre-Chr16 3064456 3065486 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00416 13 172 Cytochrome P450 AT2G32440 41.818 1.41e-42 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00416 K04123 - mtr:25491736 261.922