Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00415 ATGGGGAAAGTTTCCTTTAAATTCGTTATTCAAATTTTCTTGGGCTCTTGCGATCAAAGTACCGTGATTGAAATTGGAGATTTATTTCATGTTATGAGTAGTGCCTTGTTCTCTTTGATGCCTATAAATGTACCTGGTTTTCTTTTCAACAAAGCACTTAAGGCGCGTAAGAAATTCACCAAAATAGTTCAATCTATTATTGATGAAAGGAGAATGACAACAAAAAATGGACAAATTGGGGAAAAGAATGATTTATTAAACATTCTTTTGGAAATTAATGATGAAGAAGGTGAAAAATTGGAGGATAAGGACATTATTGACTTGCTGATATCACTTCTATTTGGAGGTCATGATTCAACTGCAGCCGGTATGATGTGGACAATTATGCATCTTACTCAACATCCACATTGTATGAAGAAAGCCAAGGAAGAGCAAGAAGAAATAATGAAAGCAAGACCACCTTCGCAAAAACGACTAAGTAATGAGGAAATTAAAAAAATGGTTTATCTTTCTCAGGTTTTTGATGAAACATTACGCCATACATCGGTCTTTTCACTTTTTCGAGAGGCAACGACTGATGTGAACATCAATGGTTATTTCATTCCAAAGGGATGGAAAGTGTTAGTTTGGCTAAGCGCTATGCATATGACTCCTGAACATCACTCAAATCCAGAAGAATATAATCCATCGAGATGGGATGGTTATAATCCAGCAACAGGAACCTTTCTTCCTTTTGGAATAGGTCGACGGCTTTGTCCAGGAAGAGACTTAAGCAGATATGAAATGACCATATTTTTACATTATTTTGTCCTTAATTACAAGTTGGAGCGGATAAATCCAGAATGTCCATTGACTAGTTTGCCATATCTTATGCCAGTAGATAACTGCCTCGCTAAGGTCATAAAGTTGTCGGATTCTTAA 921 0.3616 MGKVSFKFVIQIFLGSCDQSTVIEIGDLFHVMSSALFSLMPINVPGFLFNKALKARKKFTKIVQSIIDERRMTTKNGQIGEKNDLLNILLEINDEEGEKLEDKDIIDLLISLLFGGHDSTAAGMMWTIMHLTQHPHCMKKAKEEQEEIMKARPPSQKRLSNEEIKKMVYLSQVFDETLRHTSVFSLFREATTDVNINGYFIPKGWKVLVWLSAMHMTPEHHSNPEEYNPSRWDGYNPATGTFLPFGIGRRLCPGRDLSRYEMTIFLHYFVLNYKLERINPECPLTSLPYLMPVDNCLAKVIKLSDS 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00415 306 PANTHER CYTOCHROME P450 26 2 283 - -
Trre16g00415 306 PRINTS P450 superfamily signature 172 183 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00415 306 PRINTS P450 superfamily signature 252 263 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00415 306 PRINTS P450 superfamily signature 243 252 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00415 306 PRINTS P450 superfamily signature 115 132 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00415 306 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 245 254 IPR017972 GO:0005506|GO:0016705
Trre16g00415 306 SUPERFAMILY Cytochrome P450 9 300 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00415 306 PRINTS E-class P450 group I signature 124 150 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00415 306 PRINTS E-class P450 group I signature 252 275 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00415 306 PRINTS E-class P450 group I signature 104 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00415 306 PRINTS E-class P450 group I signature 210 234 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00415 306 PRINTS E-class P450 group I signature 242 252 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00415 306 Pfam Cytochrome P450 24 286 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00415 306 Gene3D Cytochrome P450 1 303 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00415 Trre-Chr16 3057443 3059042 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00415 3 300 Cytochrome P450 AT1G05160 46.179 1.79e-97 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00415 K04123 - ag:BAG68929 374.785