Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00410 ATGACCTACAAACTATTAGAAGAAGAAGCAATAAGTACTTGCACCCAAAATCATCAATCAGAAGACGCAAGTTACACCAAAACTCAACAATCCTCTAAAAATATACTTGGAGGATTTATCATTTGTGGAATTCTCTTTATTGTTATTATTGTCATTGGCCTAATTTTATGCCTACTATCCTGGTCAATCCCGCCTCGGACCAAGTTCAACATAGTTGAAGCCTCGATCGTGCATTTTAACATCACAAGCAACAATACCTTATATTATAATTTTAAGGTTACCATTACAGCAAAAAACTTTGAAGACGCCATAAAATCTTATGATAAGATCACTGCAATTGCTTCGTATAAAGGTAATCAATTAGCTTCGGTGAAAATGGCACCCTTTAAGTTATGTGGTAAGAATATTGTTAGGCTTGAGCCCATAGTGTTTGAAGGGAATAATGTGATGATTTTCGAGCCTCAACAACTTGCTAAATATAAGAAGGAGACACAATTAGAGGTTTACAACTTAGATTTGGACTTAGATTTGGACTATTTTAGAAGTCATGTTCATTGTCCAAATTTGCGAGTTCCTTTGATTTCCAATGGTAAAATAGCACCTCCTTTCAATGCCACTACATGCTCGTACAAGAATGATTATTGA 645 0.3504 MTYKLLEEEAISTCTQNHQSEDASYTKTQQSSKNILGGFIICGILFIVIIVIGLILCLLSWSIPPRTKFNIVEASIVHFNITSNNTLYYNFKVTITAKNFEDAIKSYDKITAIASYKGNQLASVKMAPFKLCGKNIVRLEPIVFEGNNVMIFEPQQLAKYKKETQLEVYNLDLDLDLDYFRSHVHCPNLRVPLISNGKIAPPFNATTCSYKNDY 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00410 214 PANTHER OS05G0367900 PROTEIN 41 192 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00410 Trre-Chr16 3036342 3036986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00410 68 179 SNARE and Associated Proteins AT1G32270 28.319 2.78e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00410 - - tpra:123886814 263.462