Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00390 ATGAATTCATCTGCTAGGAAATTCCACACCATCTTCATGTTCTTCTGTCTTGTCATCATTCTCCTCATTTCCACATGTGAGCCAATGGGAATATTTCAACGTCGTTGTAGCGAGACAAGTGAAGTATGGGAAGGAAAGCGTTGTCATTTTGGTAACTCGGATAACTCGAAATGTAATTCAATATGTGTAAACCAAGAACATGCAATGTCCGGTGCTTGTCAATATAATCCTCGTTCTTGCTCACTTGCTACGACTTGTTACTGCCACTACGATTGCACCAAATATAGACCGTGGGGTTAG 300 0.4133 MNSSARKFHTIFMFFCLVIILLISTCEPMGIFQRRCSETSEVWEGKRCHFGNSDNSKCNSICVNQEHAMSGACQYNPRSCSLATTCYCHYDCTKYRPWG 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00390 99 Gene3D - 32 92 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00390 Trre-Chr16 2838486 2838918 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00390 9 92 Plant Defensins Gene Families AT1G19610 33.333 6.69e-06 39.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00390 - K04985 ecad:122594496 48.521