Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00389 ATGAATTCATCTGCTAGGAAATTCTACACCGTGTTCATGTACTTGTGTCTTGTTATCTTTCTCCTTATTTCTACATGTGAGCCATTGGGAATATTTGAAAGTGGTGGTTGTAGAGAGATAAGTAAAACATGGGAAAAAAAATATTGTCATTATAATATCCCGAATAACTATGAATGTAATTCAACATGCGTCAACTTGGAGCATGCATTGTCAGGTGCTTGTCAATATAGTCCTCGTTCCTGGTCATTTCCTAGGCTTTGTTACTGCAACTACAAGTGTAACGAATATATACCGCGGTGGTTTTAA 306 0.366 MNSSARKFYTVFMYLCLVIFLLISTCEPLGIFESGGCREISKTWEKKYCHYNIPNNYECNSTCVNLEHALSGACQYSPRSWSFPRLCYCNYKCNEYIPRWF 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00389 101 Gene3D - 34 93 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00389 Trre-Chr16 2835384 2835809 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00389 9 93 Plant Defensins Gene Families AT1G19610 37.209 2.79e-06 40.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00389 - K04257 mtr:25500300 60.8474