Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00387 ATGACTTTCTCTGGTTGTAAATTCTACATCATCTTCATGTTTCTATGTCTTTCTATTCTCCTTGTTTCAACACAAGCGGTGGAAGCAAGAATTTGTAAAATTGAACGTAATACAAGATTAAAGATATATGGTTGTAATAAGCATATATGTAATGTAGACTGCGTCGAAAAGGAGTGTGCATCTTATGGTGTTTGTTTACCTGTAGCCATAATAATGACATTTTGCTACTGCTACTATAAATGCCCCATTCCAAGTCAAGAAAATCCTCCCATTCCAAGTCAAAAAACTCCTTAG 294 0.3469 MTFSGCKFYIIFMFLCLSILLVSTQAVEARICKIERNTRLKIYGCNKHICNVDCVEKECASYGVCLPVAIIMTFCYCYYKCPIPSQENPPIPSQKTP 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00387 97 Gene3D - 28 81 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00387 Trre-Chr16 2818756 2819166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00387 9 81 Plant Defensins Gene Families AT1G19610 36.842 4.89e-08 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00387 - K24550 ath:AT1G19610 46.9802