Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00379 ATGGCTGAAAAATATGGTTCAATCTTTTCCCTTAGGCTTGGTTGTCACAATACCCTAGTGGTGAGTAGTAGGGAAATAGCCAAAAAATGTCTTACAAAAAATGACCAAGTTTTTGCCTCAAGGCCTAATGTAGCCGCAGGTAGATACTTAGGTTACAATAATGCTATTTTAGCTCTTGCCCCTTATGGTGATTATTGGAGAAATATGAGAAAAATTGCCACTATTGAGCTTTTATCAAGTCATAGACTTGAAAAGCTAAAGCATGTTAGAGATTTAGAGATATATTCTCTACTAAAAAATTTGTACACATTTGTGAAAAATTCAAATGGTGCAATTGAAGTACCTATTAGCAAATATTTAGATCATATGACATTTAATATAATTGTAAGGATGATAGCTGGGAAAAGATTTGGTGGTGAAACAATAAATCAAGAAGATAGTGAGGCATGGAGATTAAGGAATGCAATTAAAGATGCAACATATCTAAGTGGTGTTTTTGTGTTTGCTGATGCTATTCCTTTCCTTAGTTGGTTTGATTTTCAAGGCCATGTTGGTTTCATGAAGAGGACTTTTAAGGAAATGGACTTTATTCTTGATAAGTGGATGCATGAGCATTTTAGAAAGAGAGATGAGGGACAAAATGGTAAAAGCCAAGATGATTTCATGGATGTGTTGATATCAATGTTTGAAGAGCATGATGAAATTTGTGGCCACAAACGAGAGGTAGTTATCAAAGCAACAGCCATGATACTAATCCTTACAGCCTCAGGAAGCACAGCAATAACACTAGGATGGGCTCTCTCCCTTCTTATAAACCATCCAAAGGTCTTAAAACAAGCCCAACAAGAATTGGACACCAACATAGGAAAACACAAATGGGTCCAAGAATCAGACATCAAAGACCTAAAATATCTTCAATCAATTATCAAAGAGACACTTAGGTTATACCCACCAGCACCTTTAACTGGAATAAGAGAAGCCACTGATGATTGCCACGTGGCAGGCTACCATATCCCTAAAGGCACACGTTTGCTTATTAACCTATGGAAATTGCAAAGGGACCCACAAATATGGTCAAACCCTAATGAATTTCAACCTGAGAGATTTTACAACACTTTTGATCAACAAGTTGATTCTCAAAATCAAGATTTTGGGTATGTGCCATTTAGCTATGGAAGAAGGTCATGTGCTGGTGCAACATTTGGGTTGCAAGTGTTGCATTTGACTTTAGCTAGGTTGATTCAAGGGTTTGATATATACACAAAAGAATGTGTTGTTGATATGAATGAAGGATTGGGATTAGCTTTGCCTAAGGAAAATCCACTTGAGGTTATGTTACAACCACGTCTTCCATTGGAGCTTTATGAGAATCTTTGA 1377 0.3667 MAEKYGSIFSLRLGCHNTLVVSSREIAKKCLTKNDQVFASRPNVAAGRYLGYNNAILALAPYGDYWRNMRKIATIELLSSHRLEKLKHVRDLEIYSLLKNLYTFVKNSNGAIEVPISKYLDHMTFNIIVRMIAGKRFGGETINQEDSEAWRLRNAIKDATYLSGVFVFADAIPFLSWFDFQGHVGFMKRTFKEMDFILDKWMHEHFRKRDEGQNGKSQDDFMDVLISMFEEHDEICGHKREVVIKATAMILILTASGSTAITLGWALSLLINHPKVLKQAQQELDTNIGKHKWVQESDIKDLKYLQSIIKETLRLYPPAPLTGIREATDDCHVAGYHIPKGTRLLINLWKLQRDPQIWSNPNEFQPERFYNTFDQQVDSQNQDFGYVPFSYGRRSCAGATFGLQVLHLTLARLIQGFDIYTKECVVDMNEGLGLALPKENPLEVMLQPRLPLELYENL 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00379 458 Gene3D Cytochrome P450 1 449 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00379 458 PRINTS E-class P450 group I signature 123 141 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00379 458 PRINTS E-class P450 group I signature 2 21 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00379 458 PRINTS E-class P450 group I signature 396 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00379 458 PRINTS E-class P450 group I signature 26 47 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00379 458 PRINTS E-class P450 group I signature 263 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00379 458 PRINTS E-class P450 group I signature 347 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00379 458 PRINTS E-class P450 group I signature 386 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00379 458 PRINTS E-class P450 group I signature 306 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00379 458 Pfam Cytochrome P450 2 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00379 458 PANTHER CYTOCHROME P450 82C3-RELATED 1 455 - -
Trre16g00379 458 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 389 398 IPR017972 GO:0005506|GO:0016705
Trre16g00379 458 PRINTS P450 superfamily signature 307 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00379 458 PRINTS P450 superfamily signature 387 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00379 458 PRINTS P450 superfamily signature 396 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00379 458 PRINTS P450 superfamily signature 254 271 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00379 458 CDD CYP82 6 449 - -
Trre16g00379 458 FunFam Cytochrome P450 82C4 1 447 - -
Trre16g00379 458 SUPERFAMILY Cytochrome P450 1 449 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00379 Trre-Chr16 2757206 2759684 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00379 1 455 Cytochrome P450 AT4G31970 46.681 2.61e-153 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00379 K17961 - gmx:100787489 670.618