Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00374 ATGGATGATGAAAGCAGTAAACTTTACATTGTATATATGGGCTCACTTCCTACGGGAACATCATATTTTCCAACCTATCATCATCTCAACATGTTGCAACAAGTCATCGATGGTGACAACATAGAAAATCGCTTAGTTCGAAGTTACAAGAAGAGTTTTAATGGTTTTGCTGCCATACTCAATGATCAACAAAGGGAAAAACTTCTCGGCATGAGAGGCGTGCTATCTGTTTTTCCAAGCCAAAAGTTTCACCTACAAACTACAAGATCGTGGGACTTCCTTGGACTTCCTCAATCAATCAAAAGAGATCAAACCACTGAAAGCGATTTGGTAATTGGAGTCATAGACAGCGGAATATGGCCAGAAGCTAAAAGTTTCAATGACAAAGGTCTTGGTCCCATTCCGAAAAAGTGGAAGGGGGTTTGTGCAGGCGGTGGTAACTTTAGTTGCAACAACAAGATCATTGGTGCACGATCTTACACTGTTGGAGAAGACAGTGCAAGAGATTATGCTGGTCATGGAACTCACACAACATCAACAACAAGTGGAAGAGAGGTGAAGGATGCAAGCTTTTATGGTCTTGCAAAAGGCATTGCAAGAGGTGGAGTTCCATCTTCAAGGATTTCTGTATACAAAGTATGCAAAGCAGATGGTAGTTGCAGTGGAAAGGATATGTTAGCTGCATTTGATGATGCAATTGCTGATGGAGTTGACATCATCACAATTTCAATTGGGGGCCAAGATGTCTATGAATTTTTGAAAGATCCTATTGCCATTGGTTCTTTTCATGCCATGGAGAAAGGGATACTAACGGTGCAGGCAGCAGGAAATAATGGTCCTTCCCCAAGTCGTGTTTCTAGTGTAGCACCTTGGTTATTTACTGTTGCTGCAACTACCATTGATCGTCAATTTATTGATAAGCTCATTCTTGGAAATGGAAAGACATTTATTGGTAAGTCAATTAATATTGTCCCCTCAAATGGCACAAAATTTCCAATAGCTAAGCGTAATGCGCAAGCTTGCCCAGGTGGATATGTAACTCCTGAAATGTGTGGTTGTATAGACAAAAATATGGTGAGGGATAAGCTTGTTTTGTGTGGAGTACAAGGGGGTGAATACTTGGCTTATGAGAATGGTGCAATTGGTTCGATCATTAATGTTACACATTCTCGAAATGATAATTCTGATGTGACTCTAAATCCTTCACTCAACTTGGATCCAAAAGACTATGTTCAAGTTCAATCTTACACAAATTCCACTAAATACCCTGTTGCTGAAATTTTGAAGAGTGAGATCTTCCATGATAACAATGCTCCTAGAATTGTCAGTTTCTCTTCTCGTGGCCCAAATTCTTTGGTTCCAGAAATTATGAAACCCGATATAAGTGCCCCTGGAGTGGATATCTTAGCAGCATATTCACCTCAAGCACCACCCTCAGAGTATCCGGGTGATAATAGAAAGGTCAAATATAACATAATATCTGGAACTTCTATGGCATGTCCCCATGTTGCTGGAGTTGCTGCATATGTAAAATCATTTCATCCAGATTGGTCACCTGCAGCTATCAAATCGGCCATCATGACAACAGCGAAACCGGTGAATGATAGTTATAATGATATGGTAGGTGAGTTTGCTTATGGATCTGGGAATGTCAATCCACATCAAGCTGTTGACCCTGGACTTGTTTATGACATCACTAAGCAAGATTATGTGCAAATGCTTTGTAATTTTGGTTATGATGCTAACAAAATTAAACAGATTAGTGGAGATAATTCAAGTTGCCATGAAGCTTCCAACAGATCATTTGTGAAGGATATAAACTATCCTGCACTGGTGATTCCTATTAAGTCTCATAAACATTTCAATGTCAAGATTCGTAGAACAGTTACAAATGTTGGCTCACCCAACTCCACCTACAAGGCTACTATCATGCCAATACGAAATATCAAGATTAGTGTGAAACCAAATGTTCTCTCTTTCAAATCATTAAACAAGAAACAACCATTTGTTGTCACTGCTGTTGGGAGAGTACAATCAAATCAAACTGTGTTTTCCTCCTCGCTTGTTTGGTCAGATGGCACCCACAATGTGAAGAGTCCAATCATTGTGCAAAGACTACCATGA 2124 0.3974 MDDESSKLYIVYMGSLPTGTSYFPTYHHLNMLQQVIDGDNIENRLVRSYKKSFNGFAAILNDQQREKLLGMRGVLSVFPSQKFHLQTTRSWDFLGLPQSIKRDQTTESDLVIGVIDSGIWPEAKSFNDKGLGPIPKKWKGVCAGGGNFSCNNKIIGARSYTVGEDSARDYAGHGTHTTSTTSGREVKDASFYGLAKGIARGGVPSSRISVYKVCKADGSCSGKDMLAAFDDAIADGVDIITISIGGQDVYEFLKDPIAIGSFHAMEKGILTVQAAGNNGPSPSRVSSVAPWLFTVAATTIDRQFIDKLILGNGKTFIGKSINIVPSNGTKFPIAKRNAQACPGGYVTPEMCGCIDKNMVRDKLVLCGVQGGEYLAYENGAIGSIINVTHSRNDNSDVTLNPSLNLDPKDYVQVQSYTNSTKYPVAEILKSEIFHDNNAPRIVSFSSRGPNSLVPEIMKPDISAPGVDILAAYSPQAPPSEYPGDNRKVKYNIISGTSMACPHVAGVAAYVKSFHPDWSPAAIKSAIMTTAKPVNDSYNDMVGEFAYGSGNVNPHQAVDPGLVYDITKQDYVQMLCNFGYDANKIKQISGDNSSCHEASNRSFVKDINYPALVIPIKSHKHFNVKIRRTVTNVGSPNSTYKATIMPIRNIKISVKPNVLSFKSLNKKQPFVVTAVGRVQSNQTVFSSSLVWSDGTHNVKSPIIVQRLP 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00374 707 ProSiteProfiles Serine proteases, subtilase domain profile. 90 557 - -
Trre16g00374 707 FunFam Subtilisin-like protease SBT1.5 574 706 - -
Trre16g00374 707 ProSitePatterns Serine proteases, subtilase family, serine active site. 495 505 IPR023828 -
Trre16g00374 707 Pfam Subtilase family 108 549 IPR000209 GO:0006508|GO:0008236
Trre16g00374 707 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 86 IPR037045 -
Trre16g00374 707 SUPERFAMILY Subtilisin-like 88 558 IPR036852 GO:0004252|GO:0006508
Trre16g00374 707 PRINTS Subtilisin serine protease family (S8) signature 169 182 IPR015500 -
Trre16g00374 707 PRINTS Subtilisin serine protease family (S8) signature 494 510 IPR015500 -
Trre16g00374 707 PRINTS Subtilisin serine protease family (S8) signature 107 126 IPR015500 -
Trre16g00374 707 FunFam Subtilisin-like protease SBT1.5 109 310 - -
Trre16g00374 707 Pfam Peptidase inhibitor I9 9 85 IPR010259 -
Trre16g00374 707 Gene3D - 301 434 - -
Trre16g00374 707 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 9 703 IPR045051 -
Trre16g00374 707 CDD Peptidases_S8_3 83 530 IPR034197 -
Trre16g00374 707 Gene3D Peptidase S8/S53 domain 109 570 IPR036852 GO:0004252|GO:0006508
Trre16g00374 707 Gene3D - 574 706 - -
Trre16g00374 707 CDD PA_subtilisin_like 308 427 - -
Trre16g00374 707 Pfam Fibronectin type-III domain 605 703 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00374 Trre-Chr16 2708817 2711465 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00374 2 706 Subtilisin-like Serine Gene Family AT5G59100 52.235 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00374 - - psat:127076787 963.37