LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre16g00372	ATGTTACAACAAATCATTGATGGTGACGACATAGAAAATCGCTTAGTTCAAAGTTACAAGAGGAGTTTTAATGGTTTTGCTGCCATACTCAATGATCAACAAAGAGAAAAACTTCTCGGCATGAGAGGTGTGCTCTCTGTTTTTCCAAGCCAAAAGTTTCACCTACAAACTACAAGATCGTGGAATTTCCTTGGACTTCCTCAATCAATCAAAAGAGATCAAACTATTGAGAGCGATTTGATAATTGGAGTCATAGACACCGGAATATGGCCAGAATCTAAAAGTTTCAATGACAAAGGTCTTGGTCCCATTCCGAAAAAGTGGAAGGGAGTTTGTGCGGGCGGTGGTAACTTCAGTTGCAACAACAAGATCATTGGTGCACGATCTTACATTGTTGAAGAAGAGGGTGCAAGAGATTATAGTGGTCATGGAACCCACACATCATCAACAGCAAGTGGAAGAGAGGTAAAGGATGTAAGCTTTTATGGTTTTGCAAAAGGCATTGCAAGAGGTGGAGTTCCATCTTCAAGGATTTCTGTGTACAAAATATGCAAAGCAGATGGTAGTTGCAATGCAAAAGATGTTTTAGCTGCATTTGATGATGCAATTGCTGATGGAGTTGACATCATCACACTCTCACTTGGGAGTGAAATTATCTATGAATTTTTGAAAGATCCTATTGCCATTGGTTCTTTTCATGCCATGGAGAAAGGGATACTAACAGTGCAGGCAGCAGGAAATAATGGTCCTTCCCCAAGTCGTGTTTCTAGTGTAGCACCTTGGTTATTTACTGTTGCTGCAACTACCATTGATCGTCAATTTATTGATAAGCTCATTCTTGGAAATGGAAAGACATTTATTGGTAAGTCAATTAATATTGTCCCCTCAAATGGCACAAAATTTCCAATAGTTGTGCGTAATGCGCAAGCTTGCCCAGGTGGATATGTAACTCCTGAAATGTGTGGTTGTATAGACAAAAATATGGTGAGGGATAAGCTTGTTTTGTGTGGAGTACAAGGGGGTGAATACTTGGCTTATGAGAATGGTGCAATTGGTTCGATCATTAATGTTACACATTCTCGAAATGAATATTCTGATGTGACTCTATATCCTTCGCTCAACTTGGATCCAAAAGATTATGTTCAAGTTCAATCTTACACAAATTCCACTAAATACCCTGTAGCTGAAATTTTGAAGAGTGAGATCTTCCATGACAACAATGCTCCTAGAATTGTCAGTTTCTCTTCTCGTGGCCCAAATTCTTTGGTTCCAGAAATTATGAAACCCGATATAAGTGCCCCTGGAGTGGATATCTTGGCAGCATATTCACCTCAAGCACCACCCTCAGAGTATCCGGGTGACAATAGAAAGGTCAAATACAACATACTATCAGGAACTTCTATGGCATGTCCCCACGTTGCTGGAGTTGCTGCATATGTAAAATCATTTCATCCAGATTGGTCACCTGCAGCTATCAAATCGGCCATCATGACCACAGCAAAACCGGTGAATGGTAGTTATGTTGATATGGTAGGTGAGTTTGCTTATGGATCCGGGAATGTCAATCCACATCAAGCTGTTGACCCTGGACTTGTTTATGACATCACTAAGCAAGATTATGTGCAAATGCTTTGTAATTTTGGTTATGATGCTAACAAAATTAAACAGATTAGTGGAGATAATTCAAGTTGCCATGAAGCTTCCAACAGATCATTTGTGAAGGATATAAACTATCCTGCACTGGTGATTCCTATTAAGTCTCATAAACATTTCAATGTCAAGATTCATTGA	1791	0.3953	MLQQIIDGDDIENRLVQSYKRSFNGFAAILNDQQREKLLGMRGVLSVFPSQKFHLQTTRSWNFLGLPQSIKRDQTIESDLIIGVIDTGIWPESKSFNDKGLGPIPKKWKGVCAGGGNFSCNNKIIGARSYIVEEEGARDYSGHGTHTSSTASGREVKDVSFYGFAKGIARGGVPSSRISVYKICKADGSCNAKDVLAAFDDAIADGVDIITLSLGSEIIYEFLKDPIAIGSFHAMEKGILTVQAAGNNGPSPSRVSSVAPWLFTVAATTIDRQFIDKLILGNGKTFIGKSINIVPSNGTKFPIVVRNAQACPGGYVTPEMCGCIDKNMVRDKLVLCGVQGGEYLAYENGAIGSIINVTHSRNEYSDVTLYPSLNLDPKDYVQVQSYTNSTKYPVAEILKSEIFHDNNAPRIVSFSSRGPNSLVPEIMKPDISAPGVDILAAYSPQAPPSEYPGDNRKVKYNILSGTSMACPHVAGVAAYVKSFHPDWSPAAIKSAIMTTAKPVNGSYVDMVGEFAYGSGNVNPHQAVDPGLVYDITKQDYVQMLCNFGYDANKIKQISGDNSSCHEASNRSFVKDINYPALVIPIKSHKHFNVKIH	596

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre16g00372	596	CDD	Peptidases_S8_3	53	500	IPR034197	-
	Trre16g00372	596	Gene3D	-	271	404	-	-
	Trre16g00372	596	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	1	56	IPR037045	-
	Trre16g00372	596	Gene3D	-	544	596	-	-
	Trre16g00372	596	Gene3D	Peptidase S8/S53 domain	79	540	IPR036852	GO:0004252\|GO:0006508
	Trre16g00372	596	SUPERFAMILY	Subtilisin-like	77	534	IPR036852	GO:0004252\|GO:0006508
	Trre16g00372	596	CDD	PA_subtilisin_like	278	397	-	-
	Trre16g00372	596	ProSiteProfiles	Serine proteases, subtilase domain profile.	60	527	-	-
	Trre16g00372	596	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	15	585	IPR045051	-
	Trre16g00372	596	ProSitePatterns	Serine proteases, subtilase family, serine active site.	465	475	IPR023828	-
	Trre16g00372	596	Pfam	Subtilase family	78	505	IPR000209	GO:0006508\|GO:0008236
	Trre16g00372	596	PRINTS	Subtilisin serine protease family (S8) signature	464	480	IPR015500	-
	Trre16g00372	596	PRINTS	Subtilisin serine protease family (S8) signature	77	96	IPR015500	-
	Trre16g00372	596	PRINTS	Subtilisin serine protease family (S8) signature	139	152	IPR015500	-
	Trre16g00372	596	Pfam	Peptidase inhibitor I9	9	55	IPR010259	-
	Trre16g00372	596	FunFam	Subtilisin-like protease SBT1.5	79	280	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre16g00372	Trre-Chr16	2704045	2706092	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre16g00372	1	596	Subtilisin-like Serine Gene Family	AT5G59100	52.893	0.0	644

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre16g00372	-		-	psat:127076787	813.913