Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00366 ATGGAAAGGTATAAAATTTTGAAAGAGCTTGGAGATGGTTCTTGCGGTCATGTATATAAAGCCTGTGATATGAGAACTTTTGAGATTGTTGCTGTCAAAAGGTTGAAAAGAAAGTTTTGCTTTTGGGAAGAATACACAAATTTAAGAGAAGTTAAGGCCCTTCGTAAAATGAATCACCCAAATATCATAAAGTTGAGAGAGGTTATTAAAGAAAATAATGAACTGTTTTTCATTTTTGAATACATGGACTGTAATCTTTATCAATTAATAAAAGAGAGAGAGAAACCCTTTTCAGAGGAAGAGATACGATGCTTTATGAAGCAAGTGCTCCAAGGACTTAGTCACGTGCACAAGAAAGGATTCTTTCATCGGGATTTAAAACCTGAAAATTTGCTGGTGACAAATGATGTTATTAAAATAGCTGATTTTGGACTGGCTAGAGAATTATCATCAATGCCTCCATATACTCAATATGTTTCCACACGGTGGTACCGGGCACCTGAAGTTTTGTTGCAGTCCCCGTGTTATACTCCTGCTGTAGACATGTGGGCTATTGGTGCTATATTAGCGGAGCTTTTTACTTTGACCCCCATATTTCCTGGTGAAAGTGAAATAGATCAACTGTACAAAATATACTGCATTCTTGGTATGCCAGATTCAACTTGTTTCACCATAGGTGCAAACAACTCTAGGCGATTGGACTTTGTTGGTCATGAAGTTGTTCCACCTATGAAGCTTTCTGATATCATTCCAAATGCTAGCACGGAAGCTATAGATTTGATCACACAATTGTTGTCGTGGGACCCATCAAGAAGGCCAGACGCGGATCAGTCACTGCAACATCCTTTTTTCCATGTGAATACAAGGGTTCCTCGTTCACTCAGTGATCCATTTGAGCTGAAGCTGAGTAACAAAAGGGCAAAGCCAAATCTTGAGCTGAAACTGCATGATTTTGGCCCTGATCCCGATGATTGTTTTCTTGGCTTGACATTGGCTGTAAAGCCAAGTGTTTCAAACTTGGATGTGGTTCAAAATGCATCCCGGGGTATGGGAGAGAATATGCTATTTTGCTCGGATTTTAATGATCATTCAGATCAATCAGTTTTTTGGACATTATTATCTCCTGATCAGAATGGAGTTCACAACTCAGCAGAGACTTCATTGTCATTGTCATTTGGATCTGTTCATCACCAGCCGATTGGAGTTCCACAGACAACAGGATTTTCTTTTCAACCTTTGCAGCCTAACATCCTAACTACACCATTTTTGACACTGTCTTCTCCATTCCAGCGCGGACATTGCCTTTGA 1308 0.3953 MERYKILKELGDGSCGHVYKACDMRTFEIVAVKRLKRKFCFWEEYTNLREVKALRKMNHPNIIKLREVIKENNELFFIFEYMDCNLYQLIKEREKPFSEEEIRCFMKQVLQGLSHVHKKGFFHRDLKPENLLVTNDVIKIADFGLARELSSMPPYTQYVSTRWYRAPEVLLQSPCYTPAVDMWAIGAILAELFTLTPIFPGESEIDQLYKIYCILGMPDSTCFTIGANNSRRLDFVGHEVVPPMKLSDIIPNASTEAIDLITQLLSWDPSRRPDADQSLQHPFFHVNTRVPRSLSDPFELKLSNKRAKPNLELKLHDFGPDPDDCFLGLTLAVKPSVSNLDVVQNASRGMGENMLFCSDFNDHSDQSVFWTLLSPDQNGVHNSAETSLSLSFGSVHHQPIGVPQTTGFSFQPLQPNILTTPFLTLSSPFQRGHCL 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00366 435 FunFam Probable serine/threonine-protein kinase DDB_G0268078 83 292 - -
Trre16g00366 435 FunFam Serine/threonine-protein kinase MHK 1 83 - -
Trre16g00366 435 ProSiteProfiles Protein kinase domain profile. 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre16g00366 435 CDD STKc_MAK_like 4 284 - -
Trre16g00366 435 SUPERFAMILY Protein kinase-like (PK-like) 1 285 IPR011009 -
Trre16g00366 435 Pfam Protein kinase domain 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre16g00366 435 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 303 - -
Trre16g00366 435 Gene3D Transferase(Phosphotransferase) domain 1 83 293 - -
Trre16g00366 435 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
Trre16g00366 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Trre16g00366 435 SMART serkin_6 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00366 Trre-Chr16 2656393 2663555 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00366 7 284 MAP Kinase Gene Family AT4G01370 39.373 1.75e-62 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Trre16g00366 Pkinase 7.5e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00366 K08829 K08830 gmx:100792842 797.349