Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00359 ATGAAGCCATTTTCAATTTTCCTCATTTTCATCCTCTTCTTCATTGCATCAGCATTAGTTTCTGCGAAGAAAGAGGCTGATGTAACAGAGTTGCAGATTGGCGTTAAGTATAAACCAGCATCATGTGAAGTTCAGGCACACAAAGGTGATAAAGTGAAAGTACACTATCGGGGAAAACTCACCGATGGAACTGTTTTCGATTCTAGCTTTGAAAGAAATAGTCCAATTGATTTTGAGCTTGGTGGTGGTCAAGTGATCAAAGGATGGGACCAAGGATTATTGGGAATGTGTCTCGGTGAGAAGCGGAAATTGAAAATACCAGCAAAACTTGGTTATGGAGAACAGGGCTCCCCACCCACTATTCCAGGTGGTGCAACACTTATATTTGACACTGAGCTTGTCGGAGTGAACGACAAAAGTTTAAACGGAGAAAAATCGGAACTTTAG 447 0.4139 MKPFSIFLIFILFFIASALVSAKKEADVTELQIGVKYKPASCEVQAHKGDKVKVHYRGKLTDGTVFDSSFERNSPIDFELGGGQVIKGWDQGLLGMCLGEKRKLKIPAKLGYGEQGSPPTIPGGATLIFDTELVGVNDKSLNGEKSEL 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00359 148 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 49 137 IPR001179 GO:0003755
Trre16g00359 148 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 43 134 IPR001179 GO:0003755
Trre16g00359 148 FunFam Peptidylprolyl isomerase 17 137 - -
Trre16g00359 148 PANTHER PEPTIDYLPROLYL ISOMERASE 9 139 IPR044609 GO:0000413|GO:0003755|GO:0061077
Trre16g00359 148 SUPERFAMILY FKBP-like 36 138 - -
Trre16g00359 148 Gene3D - 16 147 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00359 Trre-Chr16 2607140 2609947 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00359 47 134 Calmodulin-binding Proteins AT3G25230 60.227 4.26e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00359 K09569 - gmx:100305479 242.662