Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00346 ATGGAAAATGTGGTGTCAAATTGGAAGATTGCACTCACCCAAGCTGCTAGTTTGTCTGGTTGGGATGTCCCTAGTTGCAGGAGTGAAGGTGAACTAATGCAGCAAATTGTTGAGGATGTTTTGGCAAAACTTGACAGCACATTCTTGTCTATTACCGAATTTCCAGTTGGATTGGAATCTCATATTGGAATAACTGTCCTTGTAGAGCGGAGCCTTGTCAAAATTGAAAAGAATAACAAGCTGGGAATGCATGATTTGATAAGAGACATGGGTAGAGAAATTGTACGTGAAAATTCACCAAAAGATCTTGGGAAACGTAGTAGATTGTGGTTTCGCGAGGATGTACATGATGTTTTGACAAAAGATACTGGAACAGAAATTGTAGAGGGATTGGTTTTGAAGTATCAAACAAGTGTGGAAGGAAACCAAGTTGTTGAATAA 441 0.3923 MENVVSNWKIALTQAASLSGWDVPSCRSEGELMQQIVEDVLAKLDSTFLSITEFPVGLESHIGITVLVERSLVKIEKNNKLGMHDLIRDMGREIVRENSPKDLGKRSRLWFREDVHDVLTKDTGTEIVEGLVLKYQTSVEGNQVVE 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00346 146 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 48 134 IPR044974 GO:0006952
Trre16g00346 146 SUPERFAMILY "Winged helix" DNA-binding domain 43 119 IPR036390 -
Trre16g00346 146 Gene3D - 1 52 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00346 Trre-Chr16 2437763 2439960 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00346 56 133 WRKY Transcription Factor Family AT4G12020 41.026 3.63e-14 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00346 - - tpra:123923853 136.732