Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00320 ATGGCTTCCTCTCTACTTCCCTTTCTCCTCTACTCACTGATTCTTCAATCCATCTTTGTTGTAGCTCAAACCAAAAGTATCATAGATATTGGTGATTCTTTCACTGCACAAACCAACTCCTCTACATGGTTGCTTTCACCTTCTGGTGATTTTGCCTTTGGTTTTTTTCCACTTAAAAACACTACTGGTCTTTTTTTGCTTTGCATTTGGTATGCTAAAATTTCTGAGAAAACTGTTGTGTGGTATGCTAATGGAGACAGTCCTGCACCAAAAGGGTCAAAAGTGGAAATCACTGCCAATGATGGATTGGTGCTAACTTCTCCAAAGGGTGACAGGTTATGGAATACTGAAGGACTCAATGCTAAATTTTCTCGCGGTGTGTTCAATGACACCGGCAACATTGTTCTTCAGGATGGTGATTTTAACAGTCTTTGGGAGACTTTCAAGTTTCCTAGTGACACCTTGTTGCCTTCTCAGATTCTTCAAAAAGGTGGAAAGCTTTCTTCAAGGCATAGGGAGACAAATTTCAGTAAAGGAAGGTTTGAGCTTCTTTTACAAGATGATGGTTATCTTGTTATGTATTCTATTAATTTACCATCTGGTTATGCAAATGAAAACTACTATGAAAGTGGAACTGTTGGTTCCAATACATCAAGTGCTGGAACTCAATTGGTCTTTGACAGATCAGGGTACTTGTATGTCTTGGGAGAAAACAATGAGAAATATAATGTGTCAGAAGAAGAGAGTAAAGTCTCTACCACACAATTTTATCTTAGAGTAACTCTAAATTTTGATGGAGTGTTCACACTTTACAAGCATCCAAAGAGTTCAACTCAGAGTGAAGGTTGGACCATAGTGTGGTCTAAACCTGATAATATATGTGATCATATTGATTTTGAAGGGAGTGGTATTTGTGGATATAATAGCTTCTGCACATTGGGAAATGATAAGAGGCCAACATGTCAATGTCCAAAAAGCTACTCACTGGTTGATCCTGATGATCCAAATGGTAGCTGCAAGCCAAACTTCATACAAGGATGTAAAGAAGATGAACTAAGTAAAAATACAAATGATCTCTATGACTTTGAGATTATGATTAACACTGATTGGCCTCTATCAGATATTGTGCTACAAAGACCTTTTACTGAAGAACAGTGTAAGAAATCTTGTATGGAAGATTGTTTGTGTTCTGTGGCTATTTTCAGGGAAGGTGATAGTTGTTGGAAGAAGAAGTTACCACTCTCAAATGGGAGAAAAGATGCATCTCTTAATATTTCTAAGGCCTTCTTGAAAGTGAGAAAGGATAACGCCTCCCTTGTTGTTTCTCCAATTCCAATAATTCTGAACAAGAATAATAATCGACAAACTCTGGTTTTGGTTGGTTCTGTGCTTTTTGGTAGCTCTGCAATTCTAAATGCTGTATTGATTGTAGCAATCTGTGCCAGCACATCCATTTTTCAGCACAAGAAGAAGCTTAGAAGAGTTAGCAAAAGTGACACTTGTGTTGAAGTTGAATCCAATTTGCGTTGTTTCACTTATGAAGAGCTTGAAGAAGCTACCAATGGATTTGACAAAGAGCTAGGAAGGGGATCTGTTGGTATTGTGTATGAAGGAGTCATCACCAATAACATATCTTCGGAGACTCGTGTGGCAGTGAAAAAATTGAACAATGTTTTGTTGGATCAAGGTCATAGGGAATTTATGAATGAACTGAATGTCATTGGTCTCACTCATCACAAGAACTTGGTTCGTTTACTTGGATTTTGTGAAGGTGGATGTAAAAGGTTGCTTGTTTACGAGTACATGAGCAACGGCTCTTTGGCAAATTTTCTTTTCAATTCGGATGAGAAACAAAAACCAAGTTGGAAAGTAAGGCTAGAAATAGCAATAGGGATAGCTAAAGGACTTGTGTATCTACATGAAGAGTGCATCTCTTGGATCATCCACTGTGACATAAAGCCTCAGAACATACTCCTCGATGATTACTTCAATGCAAGAATTTCTGACTTTGGATTAGCCAAATTGTTGAACATGAATCAAAGCAAAACCAACACTGGCATAAAGGGAACAAGAGGGTATGTTGCCCTTGAATGGTTTAAAAACTTGCCTATCAACGCTAAGGTGGATGTGTACAGTTATGGTGTAGTGCTACTTGAGATAATATCATGTAGAAGATGTGTTGAAGAAATGGATCAAGAAGATGAAGAGAAGGTTATATTAACTGATTGGGCTTATGATTGCTACAAAGAAGATGCTATAGATGCTTTGGTTGAAGGTGACAATGAGGCATTGGAGGACAAGGAAAAGTTACAAAAATTGGTAATGATTGCCATTTGGTGTGTTCAAGAGGATCCATGTCTTAGACCAACCATGAGAAATGTGATCCATATGCTTGAAGGTACTGTTGAAGTGCAAGTTCCACCGTACCCCTCACCAATTAGTATTCAATATTCTCTAAATTAA 2463 0.3792 MASSLLPFLLYSLILQSIFVVAQTKSIIDIGDSFTAQTNSSTWLLSPSGDFAFGFFPLKNTTGLFLLCIWYAKISEKTVVWYANGDSPAPKGSKVEITANDGLVLTSPKGDRLWNTEGLNAKFSRGVFNDTGNIVLQDGDFNSLWETFKFPSDTLLPSQILQKGGKLSSRHRETNFSKGRFELLLQDDGYLVMYSINLPSGYANENYYESGTVGSNTSSAGTQLVFDRSGYLYVLGENNEKYNVSEEESKVSTTQFYLRVTLNFDGVFTLYKHPKSSTQSEGWTIVWSKPDNICDHIDFEGSGICGYNSFCTLGNDKRPTCQCPKSYSLVDPDDPNGSCKPNFIQGCKEDELSKNTNDLYDFEIMINTDWPLSDIVLQRPFTEEQCKKSCMEDCLCSVAIFREGDSCWKKKLPLSNGRKDASLNISKAFLKVRKDNASLVVSPIPIILNKNNNRQTLVLVGSVLFGSSAILNAVLIVAICASTSIFQHKKKLRRVSKSDTCVEVESNLRCFTYEELEEATNGFDKELGRGSVGIVYEGVITNNISSETRVAVKKLNNVLLDQGHREFMNELNVIGLTHHKNLVRLLGFCEGGCKRLLVYEYMSNGSLANFLFNSDEKQKPSWKVRLEIAIGIAKGLVYLHEECISWIIHCDIKPQNILLDDYFNARISDFGLAKLLNMNQSKTNTGIKGTRGYVALEWFKNLPINAKVDVYSYGVVLLEIISCRRCVEEMDQEDEEKVILTDWAYDCYKEDAIDALVEGDNEALEDKEKLQKLVMIAIWCVQEDPCLRPTMRNVIHMLEGTVEVQVPPYPSPISIQYSLN 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00320 820 SMART blect_4 35 151 IPR001480 -
Trre16g00320 820 CDD B_lectin 44 151 IPR001480 -
Trre16g00320 820 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 34 810 - -
Trre16g00320 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 22 149 - -
Trre16g00320 820 FunFam Uncharacterized protein 151 281 - -
Trre16g00320 820 Gene3D Phosphorylase Kinase; domain 1 482 601 - -
Trre16g00320 820 Gene3D Transferase(Phosphotransferase) domain 1 602 806 - -
Trre16g00320 820 Pfam S-locus glycoprotein domain 251 327 IPR000858 GO:0048544
Trre16g00320 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 602 806 - -
Trre16g00320 820 ProSiteProfiles Protein kinase domain profile. 521 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre16g00320 820 SUPERFAMILY Protein kinase-like (PK-like) 499 811 IPR011009 -
Trre16g00320 820 Gene3D - 150 282 IPR036426 -
Trre16g00320 820 ProSiteProfiles Bulb-type lectin domain profile. 30 149 IPR001480 -
Trre16g00320 820 FunFam S-receptor-like serine/threonine-protein kinase 489 601 - -
Trre16g00320 820 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 212 IPR036426 -
Trre16g00320 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672|GO:0006468
Trre16g00320 820 Pfam D-mannose binding lectin 78 162 IPR001480 -
Trre16g00320 820 PIRSF SRK 1 820 IPR024171 GO:0004674
Trre16g00320 820 SMART serkin_6 521 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre16g00320 820 Pfam Protein tyrosine and serine/threonine kinase 523 798 IPR001245 GO:0004672|GO:0006468
Trre16g00320 820 Gene3D - 31 149 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00320 Trre-Chr16 2267730 2270192 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00320 507 810 Receptor kinase-like Gene Family AT1G60800 38.629 1.53e-65 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Trre16g00320 PK_Tyr_Ser-Thr 5.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00320 - - gmx:100815462 1114.75