Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00274 ATGAGTGGTGGTGGAGAAGTTGAAGAAGGAACTGATTTGCAATTTACTCCTACATGGGTTGTTGCTCTTGTTTGCACTATCATCGTCGCTGTTTCGCTAGCCGTTGAACGTTCTCTTCATTATCTTGGCAAGTTTCTTAAGAAGAAAAATCAGAAATCACTCTTTCAAGCCTTACAAAAAATCAAAGAAGAGTTGATGCTGTTGGGTTTTATTTCTCTGCTTCTAACTGTAACACAAACTGCTATCACAAAAATTTGTGTGCCACAAAGTTGGACTCATCATATGCTTCCTTGTAGTTTTGAAGAAAAAGAACATGAAGAATCAAAATTATCATCCACTAAACATTTTCAAACTTTTTTCTCTTCCAATGATGTTTTCGCCACTGCTAGGCGCCTTCTCGCTGAGACTAATGATCATCCATCAACAGAAGAAAACCATGGATATTGTGCTTCCAAGGGAAAGGTACCTCTATTATCTGTGGAAGCACTACATCATCTGCATATATTTATTTTTGTGCTAGCTATTGTTCATGTATCTTCATGTGTTTTGACTATAATTTTTGGAGGATTAAATATTCGCCGGTGGAAGCATTGGGAAGAATCAATTGTTGCAGATGAAAATCATCAAACACAACATGCTCCGGAACGGACGGAGACGGTGACTCATGTTCATCAGCATGCTTTTATCAAGGATCATTTTACTGGTTTTGGCAAAGATTCTTCCATAATGGGATGGTTGAAATCATTTTTCAAGCAATTTTATGGATCAGTAACAAAGTTGGATTATGAGACATTAAGGCATGGTTTTATCAGGACTCATTGTAGGGGAAATCCAAAGTTTAATTTTCACAAGTACATGAACCGTGCACTTGAAGATGATTTCAAGAAAGTTGTTGGTATTAGTTGGTATCTTTGGATCTTTGTGGTCATATTTTTGTTGCTTAATATCAATGGTTGGCACACATATTTCTGGGTTGCTTTCATTCCTGTCATTCTTCTACTTGCTGTTGGAACAAAGCTAGAACATGTAATAATTCAGTTAGCACATGAAGTAGCTGAAAAACATTCAGCCATACAAGGTGAATTAGTTGTTCAACCATCAGATGATCACTTCTGGTTTCATCGTCCTCGCATCGTCCTCTTCTTGATTCACTTGATCCTTTTTCAAAACTCTTTTGAGATAGCATTTTTTTTCTGGATACTACTAACATATGGTTTTAATTCATGTATAATGGGGAAAATCAATTACATTATTCCAAGGCTCGTTATTGGGGTATTTATTCAGGTGCTATGTAGTTATAGTACCCTACCACTCTATGCTATTGTTACACAGATGGGAACTCACTTTAAGAAAGCCATATTTGATGAGCAAGTACAAGCAAGACTTGTTGGTTGGGCACAAAAGGCAAAGAAGAAAGGATTAAGAGGTGATAATAATAACCAATCTGTCCAAGGAAGTTCTCATAATGGTGGAAGTGCTAATATTCAATTAGGGTCAGTGTTTAGAAGGGGTCCTGTCCAAGAAGACAACACCATTGTCCCTACAAATGAAGAGTCCGTATGA 1563 0.3704 MSGGGEVEEGTDLQFTPTWVVALVCTIIVAVSLAVERSLHYLGKFLKKKNQKSLFQALQKIKEELMLLGFISLLLTVTQTAITKICVPQSWTHHMLPCSFEEKEHEESKLSSTKHFQTFFSSNDVFATARRLLAETNDHPSTEENHGYCASKGKVPLLSVEALHHLHIFIFVLAIVHVSSCVLTIIFGGLNIRRWKHWEESIVADENHQTQHAPERTETVTHVHQHAFIKDHFTGFGKDSSIMGWLKSFFKQFYGSVTKLDYETLRHGFIRTHCRGNPKFNFHKYMNRALEDDFKKVVGISWYLWIFVVIFLLLNINGWHTYFWVAFIPVILLLAVGTKLEHVIIQLAHEVAEKHSAIQGELVVQPSDDHFWFHRPRIVLFLIHLILFQNSFEIAFFFWILLTYGFNSCIMGKINYIIPRLVIGVFIQVLCSYSTLPLYAIVTQMGTHFKKAIFDEQVQARLVGWAQKAKKKGLRGDNNNQSVQGSSHNGGSANIQLGSVFRRGPVQEDNTIVPTNEESV 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00274 520 MobiDBLite consensus disorder prediction 476 492 - -
Trre16g00274 520 Pfam Mlo family 11 489 IPR004326 GO:0006952|GO:0016020
Trre16g00274 520 PANTHER MLO-LIKE PROTEIN 1 9 485 IPR004326 GO:0006952|GO:0016020
Trre16g00274 520 MobiDBLite consensus disorder prediction 473 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00274 Trre-Chr16 1902966 1907298 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00274 1 514 MLO family AT4G02600 64.552 0.0 670
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00274 K08472 - gmx:100811793 797.734