Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre16g00231 | ATGGACGATCTAGGTGATGATTACGATGGCATTGACGACACCTCGTCCGAGGAAGAGTTGACAGCCCAAGAGAAGCAAATTGCATATGATGCTCTTCGCATTTCAGTATCAGATTCTAGGGGATATTTGGTTGATGAAGATGAATTTGACGACATGAAAAGACTATTCATAGACCTATGCTCAGCAGTGTTGTTAAATAACTGGCCTGGGTGTCGTGTGACTAAGCAAATTGATCCTTATACTAAGCAAAGATCTCTTCTTTTTAAGTTTGATTATCCTGAGATTGAAGGCATCGCAAAGCCTAGGCATCGATTTATATCCTCCTATGAGCAGAGGGTGCAACCATTTGATAAAAGATACCAGTATCTCTTGTTTGCAGCTGAACCTTATGAAACAATTTCTTTCAAGGTACCGAGCACAGAGCACGTCTGCTCTAAAGTTTTTCTCGCCGTCAATTTCCGGGTTGAGGGACTTCATCCAACCCAACGTGGTCAAAGGAATGGTTCTCTTGAACCAAAACGATGTTTTGATGGTTTAGCTATGAATAATGTTGGAATATGA | 561 | 0.4118 | MDDLGDDYDGIDDTSSEEELTAQEKQIAYDALRISVSDSRGYLVDEDEFDDMKRLFIDLCSAVLLNNWPGCRVTKQIDPYTKQRSLLFKFDYPEIEGIAKPRHRFISSYEQRVQPFDKRYQYLLFAAEPYETISFKVPSTEHVCSKVFLAVNFRVEGLHPTQRGQRNGSLEPKRCFDGLAMNNVGI | 186 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre16g00231 | 186 | PANTHER | SPLICING FACTOR 3A SUBUNIT 2 | 69 | 142 | - | - | |
Trre16g00231 | 186 | Pfam | Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) | 69 | 143 | IPR031781 | - | |
Trre16g00231 | 186 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Trre16g00231 | 186 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
Trre16g00231 | 186 | Gene3D | - | 63 | 150 | - | - | |
Trre16g00231 | 186 | SMART | CactinC_cactus_3 | 45 | 162 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre16g00231 | Trre-Chr16 | 1659907 | 1664667 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre16g00231 | 69 | 141 | C2H2 Transcription Factor Family | AT2G32600 | 76.712 | 1.19e-33 | 119 |