Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00176 ATGTGGCTAAAACTATACAGGAAGTTTTGTGGGATAGTCCTCCTATACCTGAAAGTGAGGCAACAAGTGCATTGTTCTACTCTATATCATCAACTCATATATGCTATATGTATAAGGAAGGACGCCACTGTCGATTTCGAAGATGTTGGCCACAGTGATTCGGCAATAGAGATTATGGAAAAGTACTTTGTCGGGGAGGTTGACACCACAACCCTTCCAGCAGAAGCTAAGAAGAATACACCACCACCAGTTCAAGCAACTACCTTAAACAATCAATCTTCTGGATTCCTTTTGAAGTTCTTGCAGTACTTGGTGCCATTATTCGTATTGGGCTTTGCATTTGCTCTGCAGTACTATGGGGAAAAAAGCAAGTCCAATGAATCATAA 387 0.4109 MWLKLYRKFCGIVLLYLKVRQQVHCSTLYHQLIYAICIRKDATVDFEDVGHSDSAIEIMEKYFVGEVDTTTLPAEAKKNTPPPVQATTLNNQSSGFLLKFLQYLVPLFVLGFAFALQYYGEKSKSNES 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00176 128 PANTHER CYTOCHROME B5 39 121 - -
Trre16g00176 128 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 40 77 IPR036400 -
Trre16g00176 128 Gene3D - 24 77 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00176 Trre-Chr16 1264588 1265420 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00176 40 128 NADPH P450 reductases AT5G48810 48.315 2.22e-25 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00176 K23490 - gmx:100500069 126.331