Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00132 ATGGAAGGAGAAAGAGATGTTCCTAATTATGAGCTCCAAGTTTCCTTCACAAACACTCCTCAAGCTATCCATGAAATGGGTTTTGTTCAATTTGAAGAAAATCAAGTTCTTAGCTTCTTGTCACCCTCTACACAATCTCAACCTTCTCAACTTTCTCAATCTCTAAATTCCGGCGGTAGCACCACCAACGTCCCTACCGGTGCAGCTGCCACAACTACCACCGCGGCCGTTGGGTTTAGCCATAATGATCTTGTCACAAGAACTCCTTGGAATAATGAACAGGTGAGAACTCTAGATCCTAAAGCTGCGAGTGATGAGAATTGCACTGGAAATACTAGTGATGGCAACAACACATGGTGGAGGAGTGGAGGGTCAGAGAAGAGCAAGGTGAAAGTGAGAAGGAAGCTCAGAGAGCCTAGGTTTTGTTTCCAAACAAGAAGTGATGTGGATGTGCTTGATGATGGTTACAAATGGAGGAAGTATGGTCAGAAAGTTGTCAAGAATAGCCTTCATCCAAGAAGTTATTACCGTTGCACACATACCAACTGTCGGGTGAAAAAAAGAGTTGAACGACTCTCGGAAGATTGTCGTATGGTGATAACCACTTATGAAGGCAGACATAATCACACTCCTTGTGATGACTCTAATTCTTCCGAACACGAATGTTTTACCTCTTTCTAA 681 0.4317 MEGERDVPNYELQVSFTNTPQAIHEMGFVQFEENQVLSFLSPSTQSQPSQLSQSLNSGGSTTNVPTGAAATTTTAAVGFSHNDLVTRTPWNNEQVRTLDPKAASDENCTGNTSDGNNTWWRSGGSEKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHTNCRVKKRVERLSEDCRMVITTYEGRHNHTPCDDSNSSEHECFTSF 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00132 226 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 60 213 IPR044810 GO:0003700
Trre16g00132 226 MobiDBLite consensus disorder prediction 40 67 - -
Trre16g00132 226 SUPERFAMILY WRKY DNA-binding domain 144 210 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre16g00132 226 FunFam WRKY transcription factor 57 138 212 - -
Trre16g00132 226 ProSiteProfiles WRKY domain profile. 147 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre16g00132 226 SMART WRKY_cls 152 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre16g00132 226 MobiDBLite consensus disorder prediction 101 124 - -
Trre16g00132 226 Pfam WRKY DNA -binding domain 153 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre16g00132 226 Gene3D WRKY domain 139 205 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00132 Trre-Chr16 877119 883292 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00132 3 226 WRKY Transcription Factor Family AT2G44745 57.328 1.26e-74 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre16g00132 WRKY 2.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00132 - - var:108347245 375.17