Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00102 ATGGCCAAGAGTCATGTTGTTTTATTCTTTTTCGTGTCTTTGGTTTTGGCATCGATAATTTCTTTCATTTGTGATGCCACCAAAAGTGGTGATGAAACCAATAAACTTTATATTGTATATATGGGCGCACTCCCTAAGGAAGCATCGTATTCTCCGACCTCTCATCATCTTAGCATATTGCAACAAGTTATTTATGATAGTGATATAGAAAATCACTTGGTTCAAAGTTACAAGAGGAGTTTTAATGGTTTTTCTGTTATACTCAATGATCAACAAAGAGATAAACTTGTTGGCATGAAAGGTGTTGTCTCAGTGTTTCCAAGCCAAGAGTATCACCTTCAAACCACAAGATCGTGGGACTTCCTTGGTTTACCTCATTCAATCAAAAGAGGTAAAACTGTTGAGAGTGATTTGGTGATTGGAGTCTTAGACACCGAAATTTGGCCAGAATCTAAAAGTTTTAACGACAAAGGTCTTGTTCCTATTCCAAAAAAATGGAGGGGAGTTTGTGCAGGCGGTGGTAACTTCAGTTGCAACAATAAAATCATTGGAGCACGATGGTACCCTGGTAGTGAGGGTGAGAGTGCAAGAGACCAATTTGGGCATGGAACACATGTGGCATCAATAGTAGGCGGAAGAAAGATAAAGGGTGTGAGCTATTATGGCCTTGCAAAAGGTACTCTAAGAGGTGGAGTTCCATCTTCAAGGATTGCTGTATACAAAGTTTGTAACCCAAAATGTCGTGATGATAATATTTTAGCAGCTTTTGATGATGCCATTGCCGATGGAGTTGACATCATTAGCATATCTATTGGAAACGAATCTGCATTTGAATTTCTTAGAGATACTATTGCTATTGGTTCTTTTCATGCAATGGAAAAAGGAATACTCACAGTGCAAGGAGCAGGCAACTATGGTCCTAACCCAAGTACTATTTCAAGTGTAGCACCTTGGTTATTTAGTGTTGCCGCAACTACCATAGACCGTGAATTCATTGATAAACTCATTCTTGGAAATGGAAAGACTTTTATTGGAAAGTCGATCAATATTGTTCCCTCAAATGGCACAAAATTTCCAATAGTTGTGTGTAGTTCTACAGCTTGCCATGGAGATTATACATCCCCTAAAAAATGTCGATGTATAGATAAAAAACTGGTAAAGGGTAAGATTGTTTTGAGTGGAGATGCAGGTGGTGGACAATTGGCTTATCCGTATGGGGCAATTGGTTCGATCCTTAATTTTACATTTGAAGTTTCTCTTGTCACTCATCGACCTTCCCTTAACTTGGATTCAAAAGACTTTGATCTTGTTCAATCTTACACTTACTCCACTAAATACCCTGTAGCTGAAATATTGAAGAGTGATGTCGTTGAAGACACCACTGCTCCAAAAATTGCATCTTTCTCTTCTCGTGGTCCGAATTCTATTGTACCAGAAATTATGAAGCCAGATATAAGTGCTCCTGGAGTTGATATTTTGGCTGCATATTCACCTAACGGACCAAGCGTTGCTGATGCGGTTTATAACGTAAATGAGAAATATAGTATACTATTTGGTACCTCTATGGCATGTCCCCATGCTGCTGGAGTTGCCGCATATGTCAAATCATTTCATCCAGATTGGTCACCCGCAGCTATTAAATCTGCCATCATGACCACAACGAAACCGGTTAATGGTAATTATAATGATATGGTAGGTGAGTTCGCTTATGGATCTGGAATTGTCAATCCACAACAAGCTATTCACCCAGGACTGATTTATGACATTACTAAGCAAGATTATATGCAGATGCTTTGTAATTTTGGTTATAATGATGCCAAAATTGAACAGATTAGTGGAGAAAAATCAAGTTGCTATAGAGTTTCGAATAAAAATTTGGTTAAAGATATAAACTATCCTGCACTAGTAATTCTTCTTAGGCCTCATAAGCGTTTTAATGTTAATATTCATAGAACAGTGACAAATGTTGGCTCTCCTAACTCAACCTACACAGCTACTATCATCCCAATTCCAAATATCAAGATTAAAGTGGTGCCAAAACATCTCTCATTCAAATCCTTACATGAGAAACAAGCCTTTGTTGTCATTGTTACCGAAGGAGCAAAATCAAATCAAACTTTGTTTTCTTCATCACTTGTCTGGTCAGACGGAATCCACAATGTAAAGAGTCCAATTATTATACAAAAACTCTCTTAA 2196 0.3789 MAKSHVVLFFFVSLVLASIISFICDATKSGDETNKLYIVYMGALPKEASYSPTSHHLSILQQVIYDSDIENHLVQSYKRSFNGFSVILNDQQRDKLVGMKGVVSVFPSQEYHLQTTRSWDFLGLPHSIKRGKTVESDLVIGVLDTEIWPESKSFNDKGLVPIPKKWRGVCAGGGNFSCNNKIIGARWYPGSEGESARDQFGHGTHVASIVGGRKIKGVSYYGLAKGTLRGGVPSSRIAVYKVCNPKCRDDNILAAFDDAIADGVDIISISIGNESAFEFLRDTIAIGSFHAMEKGILTVQGAGNYGPNPSTISSVAPWLFSVAATTIDREFIDKLILGNGKTFIGKSINIVPSNGTKFPIVVCSSTACHGDYTSPKKCRCIDKKLVKGKIVLSGDAGGGQLAYPYGAIGSILNFTFEVSLVTHRPSLNLDSKDFDLVQSYTYSTKYPVAEILKSDVVEDTTAPKIASFSSRGPNSIVPEIMKPDISAPGVDILAAYSPNGPSVADAVYNVNEKYSILFGTSMACPHAAGVAAYVKSFHPDWSPAAIKSAIMTTTKPVNGNYNDMVGEFAYGSGIVNPQQAIHPGLIYDITKQDYMQMLCNFGYNDAKIEQISGEKSSCYRVSNKNLVKDINYPALVILLRPHKRFNVNIHRTVTNVGSPNSTYTATIIPIPNIKIKVVPKHLSFKSLHEKQAFVVIVTEGAKSNQTLFSSSLVWSDGIHNVKSPIIIQKLS 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00102 731 PRINTS Subtilisin serine protease family (S8) signature 198 211 IPR015500 -
Trre16g00102 731 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Trre16g00102 731 PRINTS Subtilisin serine protease family (S8) signature 518 534 IPR015500 -
Trre16g00102 731 ProSiteProfiles Serine proteases, subtilase domain profile. 110 581 - -
Trre16g00102 731 Pfam Subtilase family 136 573 IPR000209 GO:0006508|GO:0008236
Trre16g00102 731 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 37 726 IPR045051 -
Trre16g00102 731 ProSitePatterns Serine proteases, subtilase family, histidine active site. 202 212 IPR022398 -
Trre16g00102 731 Pfam Peptidase inhibitor I9 37 113 IPR010259 -
Trre16g00102 731 Pfam Fibronectin type-III domain 629 727 IPR041469 -
Trre16g00102 731 CDD Peptidases_S8_3 111 553 IPR034197 -
Trre16g00102 731 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 114 IPR037045 -
Trre16g00102 731 Gene3D - 598 730 - -
Trre16g00102 731 Gene3D Peptidase S8/S53 domain 137 594 IPR036852 GO:0004252|GO:0006508
Trre16g00102 731 CDD PA_subtilisin_like 335 451 - -
Trre16g00102 731 Gene3D - 328 458 - -
Trre16g00102 731 SUPERFAMILY Subtilisin-like 117 581 IPR036852 GO:0004252|GO:0006508
Trre16g00102 731 ProSitePatterns Serine proteases, subtilase family, serine active site. 519 529 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00102 Trre-Chr16 681864 685216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00102 7 727 Subtilisin-like Serine Gene Family AT3G46850 50.545 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00102 - - psat:127076787 908.286