Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00032 ATGGTGAAGGGCAAGCTTGTTTTGTGTGGAGGAGGTGGAATGCTTTCTTCTAATACAGGTATAATTGGTTCAATACGTAATGTTACAGACTCTGGATTTGATGTTTTTTCTACCACTTACAAGCCTTCCCTTAACTTGAAAACCAAAGACTTTGTTCAAGTTCAATCTTACACAAACTCTACTAAATACCCTGTAGCTGAAATTTTAAAGAGTGAGATCTTCCACGACACCAATGCTCCTAAAGTTGCAATTTTCTCTTCTCGTGGCCCAAATCCTTTGGTTCCAGAAATTATGAAACCAGATATAAGTGCTCCTGGAGTGAATATCTTAGCTGCATATTCACCTTTAGCGGAATCCGAAGATATGGATGACAAGAGAAAGTTCAAATACACCCTATTATCTGGAACCTCTATGGCATGTCCTCACGTGGCTGGAGTTGTTGCATATGTAAAATCATTTCATCCAGACTGGTCACCGGCAGCTATCAAATCTGCCATTATGACAACTGCTAAACCTGTAAAAGGTACTTATGTTGATTTGGCAGGTGAATATGCTTATGGATCTGGGAATGTCAATCCACAACAAGCCCTTCATCCTGGACTTGTTTATGACATCACTAAGCAAGATTATGTGCAAATGCTTTGTAATTATGGTTATGATGAAAACAAAATTAAACAAATTAGTGGAGATAATTCTAGTTGCCATGAAGCTCCTGAAAGATCCTTGTTGAAAGATATAAACTATCCTGCAATGGTAATTCTGGTTGTGCCTGATAATAAGCCTTTCCATGTCAAGATTCATAGAACAATCACAAACGTTGGCTTTCCCAACTCAACCTACAAGGCTACTCTCATCCATCATAATCCAAAAATCAAGATCAAAGTTGAACCAAAACTTCTCAAATTCAAATCATTTCATGAGAAACAATCATTTGTTGTCACTATTATTGGGGGAGACAAATTAAATCAAATTGTGTTTTCCTCATCACTCATTTGGTTCGATGGCACCCATAGCGTCAAAAGTCCTATTATTGTGCAAATACTACCTTTATAA 1053 0.3742 MVKGKLVLCGGGGMLSSNTGIIGSIRNVTDSGFDVFSTTYKPSLNLKTKDFVQVQSYTNSTKYPVAEILKSEIFHDTNAPKVAIFSSRGPNPLVPEIMKPDISAPGVNILAAYSPLAESEDMDDKRKFKYTLLSGTSMACPHVAGVVAYVKSFHPDWSPAAIKSAIMTTAKPVKGTYVDLAGEYAYGSGNVNPQQALHPGLVYDITKQDYVQMLCNYGYDENKIKQISGDNSSCHEAPERSLLKDINYPAMVILVVPDNKPFHVKIHRTITNVGFPNSTYKATLIHHNPKIKIKVEPKLLKFKSFHEKQSFVVTIIGGDKLNQIVFSSSLIWFDGTHSVKSPIIVQILPL 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00032 350 Gene3D Peptidase S8/S53 domain 76 210 IPR036852 GO:0004252|GO:0006508
Trre16g00032 350 ProSitePatterns Serine proteases, subtilase family, serine active site. 135 145 IPR023828 -
Trre16g00032 350 SUPERFAMILY Subtilisin-like 11 197 IPR036852 GO:0004252|GO:0006508
Trre16g00032 350 ProSiteProfiles Serine proteases, subtilase domain profile. 1 197 - -
Trre16g00032 350 Pfam Subtilase family 50 178 IPR000209 GO:0006508|GO:0008236
Trre16g00032 350 Pfam Fibronectin type-III domain 245 345 IPR041469 -
Trre16g00032 350 Gene3D - 2 75 - -
Trre16g00032 350 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 345 IPR045051 -
Trre16g00032 350 Gene3D - 214 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00032 Trre-Chr16 232076 233128 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00032 2 348 Subtilisin-like Serine Gene Family AT5G59090 47.863 1.22e-102 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00032 - - mtr:11439741 428.328