Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00030 ATGGGCTCACTTCCTAAAGGAGCATCATATTCCCCAACCTCTCACCATATTAACTTGTTGGAACAAGTTATCGATGATAGTGACATACAAAATTGCTTAGTTCGAAGTTACAAGAGGAGTTTCAATGGTTTTGCCGCTATACTCAACGATCAACAAAGGAAAAAACTTGTCGGCATGAGAGGTGTGGTGTCAGTTTTTCCAAGCCCAGAATACCAGCTTAAAACCACGAGGTCGTGGGATTTTCTTGGTTTACCTCAATCAATCAAGCGAGACCAAACTGTTGAAAATGATTTGGTGATCGGAGTAATAGATACTGGAATTTGGCCAGAATCTGAAAGTTTCAACGATAAAGGTCTTGGTCCAATTCCAAGAAAATGGAAGGGAGTTTGTGCAGGTGGTGGTAACTTTAGTTGCAACAAGAAAATAATCGGAGCACGATTTTATGATGGTATAGATGAGAGTGCAAGAGACAATATTGGTCACGGATCCCACACATCATCAATAGCTGGCGGAAGAGATGTGGAAGGTGTGAGTTTTTATGGTCTTGCAAAAGGCACTGCAAGAGGTGGAGTCCCATCTTCAAGAATTGCTGCATACAAAGTTTGTTTTGAAATGAGATGCATTGGAGCTTCAATTTTAGCTGCATTTGATGATGCAATTGCTGATGGAGTTGACGTCATCACCATCTCTATGGGTTATCCGACAATACTTGACTTTGTGAACGATCCAGTTGCCATTGGTTCATTTCATGCCATGGAAAAAGGAATACTCACAACGCAGGCTGCAGGAAACTCTGGTCTTTCGCCAAGTAGTGTCATAAGTGCAGCACTGATAAGTGCTAAAAAGTAG 849 0.4158 MGSLPKGASYSPTSHHINLLEQVIDDSDIQNCLVRSYKRSFNGFAAILNDQQRKKLVGMRGVVSVFPSPEYQLKTTRSWDFLGLPQSIKRDQTVENDLVIGVIDTGIWPESESFNDKGLGPIPRKWKGVCAGGGNFSCNKKIIGARFYDGIDESARDNIGHGSHTSSIAGGRDVEGVSFYGLAKGTARGGVPSSRIAAYKVCFEMRCIGASILAAFDDAIADGVDVITISMGYPTILDFVNDPVAIGSFHAMEKGILTTQAAGNSGLSPSSVISAALISAKK 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00030 282 Pfam Subtilase family 97 269 IPR000209 GO:0006508|GO:0008236
Trre16g00030 282 Pfam Peptidase inhibitor I9 11 73 IPR010259 -
Trre16g00030 282 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 274 IPR045051 -
Trre16g00030 282 ProSiteProfiles Serine proteases, subtilase domain profile. 78 282 - -
Trre16g00030 282 SUPERFAMILY Subtilisin-like 77 275 IPR036852 GO:0004252|GO:0006508
Trre16g00030 282 Gene3D Peptidase S8/S53 domain 97 275 IPR036852 GO:0004252|GO:0006508
Trre16g00030 282 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 74 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00030 Trre-Chr16 217409 219642 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00030 1 276 Subtilisin-like Serine Gene Family AT5G58840 58.781 1.45e-115 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00030 - - psat:127076787 404.445