Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g05660 ATGGCAAGCGCAAATGTAGTTGTTAGTGTTGGTGAAGCTGAAGAACACAATAATAAGCTGATTCTGTATTCATATTGGAGGAGTTCATGTTCCTTCCGAGCCCGAATTGCTCTCAACTTCAAAGGCCTCAAATATGACTACAAACCAGTCAATCTCTTGAAGGGAGAACAAAATCATCCTGAGTTTCTCCAGCTCAACCCTGTTGGTCTTGTTCCTGTTCTCCTCGATGGCCCTGTTGTAATTTCCGACTCTTTCGCCATTATTATGTATTTGGAGGATAAGTATCCTCAACATCCTTTGCTCCCTACTGATATTCACAAAAGAGCACTCAATTTCCAGGCTGTCAGTATTGTTACTTCATCAATACAACCTCTTCAAAACCTAACTCTCCTGAAGTACATCGAGGCAAACGTTGGCCCTGATGAGAAACTTCCATGGGTCCAGAGTGTAATTAGAAAAGGCTTCACAGCTCTTGAAAAGCTATTGAAAGAACACACTGGGAGGTATGCTACTGGAGATGAAGTTTCCATGGCGGATATATTTTTAGCACCTCAGTTACATACTGCAGTTAACAGATTTAACATTGACATGAATGAGTTCCCTACTCTATCAAGATTACATGAGACATATTATGAGATCCCAGCATTCCGGGAGGCTTTGCCAGAGAATCAGCCAGATGCAGCAGGCTAG 690 0.4217 MASANVVVSVGEAEEHNNKLILYSYWRSSCSFRARIALNFKGLKYDYKPVNLLKGEQNHPEFLQLNPVGLVPVLLDGPVVISDSFAIIMYLEDKYPQHPLLPTDIHKRALNFQAVSIVTSSIQPLQNLTLLKYIEANVGPDEKLPWVQSVIRKGFTALEKLLKEHTGRYATGDEVSMADIFLAPQLHTAVNRFNIDMNEFPTLSRLHETYYEIPAFREALPENQPDAAG 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g05660 229 Gene3D Glutaredoxin 17 102 - -
Trre15g05660 229 Gene3D - 103 229 - -
Trre15g05660 229 PANTHER MALEYLACETOACETATE ISOMERASE 20 227 - -
Trre15g05660 229 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 104 229 IPR010987 -
Trre15g05660 229 Pfam Glutathione S-transferase, N-terminal domain 19 92 IPR004045 -
Trre15g05660 229 CDD GST_C_Zeta 106 224 IPR034330 -
Trre15g05660 229 SFLD Glutathione Transferase (cytosolic) 21 209 IPR040079 -
Trre15g05660 229 CDD GST_N_Zeta 20 92 IPR034333 -
Trre15g05660 229 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 18 99 IPR004045 -
Trre15g05660 229 FunFam Glutathione S-transferase Z1 18 102 - -
Trre15g05660 229 SUPERFAMILY Thioredoxin-like 17 102 IPR036249 -
Trre15g05660 229 SUPERFAMILY GST C-terminal domain-like 99 226 IPR036282 -
Trre15g05660 229 Pfam Glutathione S-transferase, C-terminal domain 144 217 IPR004046 -
Trre15g05660 229 NCBIfam maleylacetoacetate isomerase 21 227 IPR005955 GO:0003824|GO:0005737|GO:0009072
Trre15g05660 229 FunFam Maleylacetoacetate isomerase 103 229 - -
Trre15g05660 229 SFLD Main (cytGST) 21 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g05660 Trre-Chr15 64824559 64827895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g05660 16 226 Glutathione S-transferase Gene Family AT2G02380 62.085 3.10e-99 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g05660 K01800 - gmx:547590 323.939