Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g05640 ATGCCAATGAAGAAGAAGCTTGATATTAATGATGATGATGATGATGATGATGAGTGCTTTCGCTACCACGATCATGAATCCGATGAAGAAAACACGTCAGGTTGTGGTTGCGGTTTTATTGGGTTCAGGAAAAGTCAAGTGTTTGATTACAATTCCAATAGCGAGATAGAAGAAGAAGATGATGATGAAGATTCAGATGAAGACCTATTTGAGATAAATCTGAAGAAGGAAGAAGCATTAGATTCAATAAGAGAAGAAGAAGAGTGTGAGAGCAGTTGTAGTAGTACTGTGTTCTCTCTTGATATCCATAACGATAAATTAGATGATGTTGTTTATGTAGCAGTTGGGGAAAGTAGCTGTTGTTCAAGTATGGAAGCTCTTTCATGGGCCTTGAAACACTCTGTCACACCTAATTCTACTATTGTCTCTCTCATACATGTTTTCCCTCAAGTCAAGCTAATTCCAACTCCATTGGGAAAAATGCCAAGGGCTCATGTAAATGAAGATCATGTTAACATCTACTTGACCCAAGAGAAAAGCAAGAGGAAAATACTCCTTCAAAAGTTCATTGACCTATGTGTTGACTCAAAGGTTAAGGTGGAGGTGTTGCTTATTGAGGGTGACAACGTTGCTAAAGCCATTGTGGACCTTGTAGGGAATCTAAATATAAGGAAATTGGTGATTGGAACTACCCAATCTAATCTAAGAAAACATGTTTCAAGAAGGCAAAATTCGATTGCGGACATGGTGTTAAAAACTATACAAGAAAGTTGTGATGTCAAAATCATATGTGAAGGAAAAGAAGTGATCGATCAAATGATTAATGGCAGCACTTCACAACACTCCAAAGAATCGCAGGATTTGGTTCCACTCAAGGGTTTGATGCCTAATTTATTTTGGTCCAGATTTTTCTGA 915 0.377 MPMKKKLDINDDDDDDDECFRYHDHESDEENTSGCGCGFIGFRKSQVFDYNSNSEIEEEDDDEDSDEDLFEINLKKEEALDSIREEEECESSCSSTVFSLDIHNDKLDDVVYVAVGESSCCSSMEALSWALKHSVTPNSTIVSLIHVFPQVKLIPTPLGKMPRAHVNEDHVNIYLTQEKSKRKILLQKFIDLCVDSKVKVEVLLIEGDNVAKAIVDLVGNLNIRKLVIGTTQSNLRKHVSRRQNSIADMVLKTIQESCDVKIICEGKEVIDQMINGSTSQHSKESQDLVPLKGLMPNLFWSRFF 304
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre15g05640 304 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 47 285 - -
Trre15g05640 304 Gene3D HUPs 108 281 IPR014729 -
Trre15g05640 304 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 113 239 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre15g05640 Trre-Chr15 64687437 64688721 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g05640 113 267 U-box Gene Family AT4G25160 31.410 3.10e-16 77.4