Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g05639 ATGATGCCAATGAAGAAGAAGCTTGATATTAATGATGATGATGATGATGATGATGAGTGCTTTCGCTACCACGATCATGAATCCGATGAAGAAAACACGTCAGGTTGTGGTTGCGGTTTTATTGGGTTCAGGAAAAGTCAAGTGTTTGATTACAATTCCAATAGCGAGATAGAAGAAGAAGATGATGATGAAGATTCAGATGAAGACCTATTTGAGATAAATCTGAAGAAGGAAGAAGCATTAGATTCAATAAGAGAAGAAGAAGAGTGTGAGAGCAGTTGTAGTAGTACTGTGTTCTCTCTTGATATCCATAACGATAAATTAGATGATGTTGTTTATGTAGCAGTTGGGGAAAGTAGCTGTTGTTCAAGTATGGAAGCTCTTTCATGGGCCTTGAAACACTCTGTCACACCTAATTCTACTATTGTCTCTCTCATACATGTTTTCCCTCAAGTCAAGCTAATTCCAACTCCATTGGGAAAAATGCCAAGGGCTCATGTAAATGAAGATCATGTTAACATCTACTTGACCCAAGAGAAAAGCAAGAGGAAAATACTCCTTCAAAAGTTCATTGACCTATGTGTTGACTCAAAGGTTAAGGTGGAGGTGTTGCTTATTGAGGGTGACAACGTTGCTAAAGCCATTGTGGACCTTGTAGGGAATCTAAATATAAGGAAATTGGTGATTGGAACTACCCAATCTAATCTAAGAAAACATGTTTCAAGAAGGCAAAATTCGATTGCGGACATGGTGTTAAAAACTATACAAGAAAGTTGTGATGTCAAAATCATATGTGAAGGAAAAGAAGTGATCGATCAAATGATTAATGGCAGCACTTCACAACACTCCAAAGAATCGCAGGATTTGGTTCCACTCAAGGGTTTGATGCCTAATTTATTTTGGTCCAGATTTTTCTGA 918 0.3769 MMPMKKKLDINDDDDDDDECFRYHDHESDEENTSGCGCGFIGFRKSQVFDYNSNSEIEEEDDDEDSDEDLFEINLKKEEALDSIREEEECESSCSSTVFSLDIHNDKLDDVVYVAVGESSCCSSMEALSWALKHSVTPNSTIVSLIHVFPQVKLIPTPLGKMPRAHVNEDHVNIYLTQEKSKRKILLQKFIDLCVDSKVKVEVLLIEGDNVAKAIVDLVGNLNIRKLVIGTTQSNLRKHVSRRQNSIADMVLKTIQESCDVKIICEGKEVIDQMINGSTSQHSKESQDLVPLKGLMPNLFWSRFF 305
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre15g05639 305 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 48 286 - -
Trre15g05639 305 Gene3D HUPs 109 282 IPR014729 -
Trre15g05639 305 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 114 240 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre15g05639 Trre-Chr15 64687434 64688721 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g05639 114 268 U-box Gene Family AT4G25160 31.410 3.09e-16 77.4