LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre15g05635	ATGTTCAACCACAACTACAGCACCTCCTCCGGCGTGTGTGAGATCACAGAGGAGGAAGTCCAGACAATCAACCACCACCAGATTGATGATAATGAAATTGAAGAAGAAGAGTGTGTTTATGTGGCGGTTGGTAAGAGTGATACAAGTATGGAAGCACTCTCATGGACACTCAATAACTTGATTAGTACTCATCACTCTACCAATACCATGCTCTATCTCATACATGTTTTCCCAGAAATCAAACACATTCCACATCCATTGGGAGTAGGAATGATTGCAAGGAATCAAGTGAGTGCTGAGCAAGTGGAGATTTATATGGACCAAGAAAGAGACAAGAGGAGACAACTCCTTCACAAGTTCCTCCATTCTTGCTCTCTTTCCAAAGTTAAGGTGGACACCATCCTAATAGAAAGTGACTTGGTTGCTAAAGCCATCCTTGACCTTATTCCCATTCTTCAAATCACTAATTTAGTCATTGGTGCCAACAAATCCAATCTAAGAAAATCAAGATCAAAGAAAGGAAATGGTGGTGTTGCTGATCAGGTAGTGCAGAATGCACCACAAAATTGCAAGGTTAGAATTATTTGTGAAGGTAATGAAGTGAATGAGCAAATGATGATGATGTCACCCTCACCCTCTCCTCAGATAATTACCACTACTAACAACTCTGCAAATAATGATACTTCGGTGAACACTAAAGAAAATGATTCTGTTTTATGTGTTTGTTTCAAGCCAAAGGTTAAATAA	747	0.3963	MFNHNYSTSSGVCEITEEEVQTINHHQIDDNEIEEEECVYVAVGKSDTSMEALSWTLNNLISTHHSTNTMLYLIHVFPEIKHIPHPLGVGMIARNQVSAEQVEIYMDQERDKRRQLLHKFLHSCSLSKVKVDTILIESDLVAKAILDLIPILQITNLVIGANKSNLRKSRSKKGNGGVADQVVQNAPQNCKVRIICEGNEVNEQMMMMSPSPSPQIITTTNNSANNDTSVNTKENDSVLCVCFKPKVK	248

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre15g05635	248	Gene3D	HUPs	31	207	IPR014729	-
	Trre15g05635	248	PANTHER	U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE	4	247	-	-
	Trre15g05635	248	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	41	188	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre15g05635	Trre-Chr15	64673660	64674789	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre15g05635	36	220	U-box Gene Family	AT1G01680	27.604	5.67e-11	59.7

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre15g05635	-		-	gmx:100527773	291.582