Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g05619 ATGAAGCTCCACTACCTTAATTCACTGTTTCTTCTTGTGATCATCTTGAATCTAAGTACCAATATTTATGGTCTCTCATCATCACAACTTGTGCCTAAAAAGATATTGAAGCCCTTATTACCACCTCCTGAAGCCTTGCTCTCAATTGGTCACTATCATGGAACATGTCCAGATGCTGAACGCATTATCTCACAAAAAGTTGCTGCTTGGATTAAGAAGGACCCTACATTGGCCCCATCCATCATCCGCTTGCATTTCCATGATTGTGCCATCAGAGGATGTGATGCATCAATTTTGCTTAACCACTTAGGGAGTGAGAGAAAAGCTTTTGAGAGTAGATCCTTGAGAGTGTAA 354 0.4096 MKLHYLNSLFLLVIILNLSTNIYGLSSSQLVPKKILKPLLPPPEALLSIGHYHGTCPDAERIISQKVAAWIKKDPTLAPSIIRLHFHDCAIRGCDASILLNHLGSERKAFESRSLRV 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g05619 117 Pfam Peroxidase 64 116 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre15g05619 117 Gene3D - 47 117 - -
Trre15g05619 117 ProSiteProfiles Plant heme peroxidase family profile. 46 117 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre15g05619 117 PRINTS Plant peroxidase signature 80 100 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g05619 117 PRINTS Plant peroxidase signature 56 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g05619 117 ProSitePatterns Peroxidases active site signature. 78 89 IPR019794 GO:0004601
Trre15g05619 117 PANTHER PEROXIDASE 25-RELATED 16 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g05619 117 SUPERFAMILY Heme-dependent peroxidases 47 113 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g05619 Trre-Chr15 64534833 64536549 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g05619 42 116 Peroxidase AT1G30870 48.000 4.82e-22 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g05619 K00430 - gmx:100792775 162.925