Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g05600 ATGAACGACTTGCTTTACAATCTTTTGATGGAGTATCTTAATGAGTCATCCGTGTTGCATTCGCAACAGAAGTCTACAGTAGGAACTCCAGCTTACGTTGCATCTGAGGTCCTGATGAAGAAAGAATACGATGGAAAGATTGCAGATGTTTCTTCTTGTGGAATCGCCTTATACGCGATGTTAGCTAGCACTTATATAATATGA 204 0.3971 MNDLLYNLLMEYLNESSVLHSQQKSTVGTPAYVASEVLMKKEYDGKIADVSSCGIALYAMLASTYII 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g05600 67 Gene3D Transferase(Phosphotransferase) domain 1 8 67 - -
Trre15g05600 67 ProSiteProfiles Protein kinase domain profile. 1 67 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g05600 67 PANTHER SERINE/THREONINE KINASE 21 66 - -
Trre15g05600 67 SUPERFAMILY Protein kinase-like (PK-like) 21 64 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g05600 Trre-Chr15 64351451 64352084 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g05600 1 62 CBL-interacting serine-threonine protein kinases AT5G10930 48.387 1.54e-12 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Trre15g05600 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g05600 K14498 - mof:131163020 83.9593