Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g05576 ATGAAAGCCTCAAAGCAACAAAGAGGATGCAAGGCCTTGTGTTGTAGCAGCAGCAGGTTTAGTGTTTCTTCTTCAGAGGAAGCGGAGAGTTCTTCTTCTGCCTCTAGTAGGTTCCCTTCTGTTTCTACACTAGCACATGCTATGGTGCAAGAGAGACTTGACCAAATGATTAGAGAAAAGCTTGAAGCTAGACATGTAGAGAGAAAGGAGCAGAGAAGAAGATCAGAAGGAACTAAGTTTGTTGTAATGTTAGCTATGGAAAAATGTTCTTATGATCCTAGAGAGGATTTTAGGGAGTCAATGATGGAAATGATAACTGCAAATCGCCTTCAAGACGTGAAAGATCTTCGTAGTTTATTGAACTATTATATGTCGATGAATTCGGAAAAATATCATAGTCTTATACTTGAAATTTTTCATGAGGTTTGTACTAATTTGTTCTTATCATGGAGTAAATGCCAATGGTGA 468 0.3803 MKASKQQRGCKALCCSSSRFSVSSSEEAESSSSASSRFPSVSTLAHAMVQERLDQMIREKLEARHVERKEQRRRSEGTKFVVMLAMEKCSYDPREDFRESMMEMITANRLQDVKDLRSLLNYYMSMNSEKYHSLILEIFHEVCTNLFLSWSKCQW 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g05576 155 Pfam Transcriptional repressor, ovate 90 147 IPR006458 -
Trre15g05576 155 NCBIfam uncharacterized plant-specific domain TIGR01568 85 147 IPR006458 -
Trre15g05576 155 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 19 147 IPR038933 GO:0045892
Trre15g05576 155 ProSiteProfiles OVATE domain profile. 86 145 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g05576 Trre-Chr15 64223776 64224243 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Trre15g05576 Ovate 1.2e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g05576 - - var:108330150 207.608