Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g05565 ATGGAGATATCTCTTCCTTTGGTTCTGCTTACCATTGTAGCTATTATGGCTATGCCACTGCCACTTTCATTTGGGGTAAATGGAAACCAACTTTCTTACAACTACTACAAGTATTCGTGTCCAAACTTGGAAAGTTTGGTTGAGAAAGAATTGATGAGCTTATTCTTGACAGATATTACTGCACCATCTTCATTTCTCAGGCTCATGTTTCATGACTGTCAAGTTCAGGGATGTGATGCATCAATTTTGTTGAACACAAACTACATTACTCGAAGCACTGAAATAACATCGTCGAGAAACTTTGGCATCAAACATAGGGAAACAATCGACGACATAAAATCAGCGTTAGAAGAAGAATGTCCGGGACAAGTATCTTGTGCAGATATCATTGTATTAGCTGCTAAGGTATCAGTTTTCGTTTCTGGAGGACCTAGTATTGAGGTTCCACTTGGAAGAAAAGATTCAACAACTTCAAGTTCTAAACAAGCTGATGTTAAGCTTCCTTCACCAACAATATCAGTTGATGAATTTATCTCCATTTTCAAATCTAAAGGAATGAGCATTCAAGAAGCTGTTGCCATTTTAGGTGCACATACACTAGGTGTTGGACACTGCTTAAACATTGTTGGCAGATTGTATAATCAACAACATATAAAAGACAATATGGATTGGAGGTATAAATCCTCACTAAGACTAGCATGTCCAACAGAGATTCCTATGACAAACCTAACATTTGTGCCTAATGACATGACCCCTACATTATTTGACAATCATTATTACAGAGACATTATGTTGGGGAGAGGTTTATTTGGTATTGACTCATACATTTCTACAGATCCACGAACAGCACCCTTTGTCATGAGGTTTGCTGTGGATCAGGACTACTTCTTTGACTCCTTCAAATCTGCATTTGTTAAGCTTTCTTCTTCCAATGTTCTCACAAACATGCAGGGTGAAGTAAGAAGGAAATGCTACCAGAGAAACTAA 987 0.3789 MEISLPLVLLTIVAIMAMPLPLSFGVNGNQLSYNYYKYSCPNLESLVEKELMSLFLTDITAPSSFLRLMFHDCQVQGCDASILLNTNYITRSTEITSSRNFGIKHRETIDDIKSALEEECPGQVSCADIIVLAAKVSVFVSGGPSIEVPLGRKDSTTSSSKQADVKLPSPTISVDEFISIFKSKGMSIQEAVAILGAHTLGVGHCLNIVGRLYNQQHIKDNMDWRYKSSLRLACPTEIPMTNLTFVPNDMTPTLFDNHYYRDIMLGRGLFGIDSYISTDPRTAPFVMRFAVDQDYFFDSFKSAFVKLSSSNVLTNMQGEVRRKCYQRN 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g05565 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Trre15g05565 328 FunFam Peroxidase 168 307 - -
Trre15g05565 328 Pfam Peroxidase 48 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre15g05565 328 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g05565 328 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g05565 328 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g05565 328 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g05565 328 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g05565 328 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g05565 328 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g05565 328 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g05565 328 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g05565 328 ProSiteProfiles Plant heme peroxidase family profile. 30 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre15g05565 328 SUPERFAMILY Heme-dependent peroxidases 30 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre15g05565 328 Gene3D - 34 328 - -
Trre15g05565 328 CDD secretory_peroxidase 30 324 IPR033905 GO:0004601|GO:0042744
Trre15g05565 328 PANTHER - 13 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g05565 328 Gene3D Peroxidase, domain 2 168 307 - -
Trre15g05565 328 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre15g05565 328 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre15g05565 328 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre15g05565 328 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre15g05565 328 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g05565 Trre-Chr15 64131407 64133251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g05565 77 324 Peroxidase AT3G17070 52.778 9.45e-89 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g05565 K00430 - gmx:100806951 478.404