Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g05507 ATGATATCACAAATCAACTACACATCTTCATTACCCTTTACCATCTCTTCTTCTTCAAGGTCTAAACTAATTTCCACAATACCCACTTTTCACAATGTTCTAAACAACACAAATAACCTCTCTTTATCTTCCCTCAAACCTCTTTACATATCAACCACTGAAAACTTCAAATTCTCAACAACAAAACTCAGAAAGAGTGTAACAGAATGTCATGCTTATGAAGAAGCAGATAGGTCACAGCCATTGGAGATTAACATTGCTGAACAAGCAGCTAAGTTTAAAATTGGTTTGTATTTTGGTACTTGGTGGGCTTTGAATGTTGTGTTTAATATTTACAACAAGAAGGTTTTGAATGCTTTTCCTTATCCATGGCTTACTTCAACTTTGTCCCTTGCTGCTGGTTCTCTCATCATGTTAGTCTCATGGGCTACAAGGGTTGCTGAGGCTCCTAAGGTTAATTTGGACTTTTGGAAGGCCTTGTTTCCTGTTGCTGTGGCACATACAATTGGGCATGTTGCAGCTACTGTGAGTATGTCCAAAGTTGCAGTTTCATTTACACACATCATCAAAAGTGGAGAGCCTGCTTTCAGTGTTCTGGTATCAAAGTTCTTGCTTGGGGAAGCCTTCCCTTTGCAGGTTTACCTTTCATTAATACCAATCATTGGAGGTTGTGCACTTGCTGCTGTCACTGAGCTTAATTTCAATATGATTGGGTTTATGGGGGCTATGATATCCAATGTGGCCTTTGTGTTTAGGAATATATTCTCAAAGAAGGGAATGAAAGGGATGTCTGTTAGTGGAATGAACTACTATGCTTGCCTCTCCATATTATCTCTATTGCTTCTCACCCCTTTTGCTATTGCTGTGGAAGGCCCAAAGATGTGGGCTGCCGGCTGGCAAACAGCAGTGTCACAGATTGGTCCCAATTTTGTCTGGTGGGTAGCTGCACAAAGTGTGTTCTACCACTTGTACAATCAAGTCTCTTATATGTCTCTTGATCAGATTTCTCCATTAACATTTAGCATAGGGAACACAATGAAGAGAATCTCGGTTATTGTCTCGTCGATTATTATCTTCCACACGCCAATTCAGCCAAACAATGCCCTTGGTGCCGCCATTGCAATCCTTGGCACTTTCCTCTATTCACAGGCTAAACAGTAA 1161 0.4057 MISQINYTSSLPFTISSSSRSKLISTIPTFHNVLNNTNNLSLSSLKPLYISTTENFKFSTTKLRKSVTECHAYEEADRSQPLEINIAEQAAKFKIGLYFGTWWALNVVFNIYNKKVLNAFPYPWLTSTLSLAAGSLIMLVSWATRVAEAPKVNLDFWKALFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSKFLLGEAFPLQVYLSLIPIIGGCALAAVTELNFNMIGFMGAMISNVAFVFRNIFSKKGMKGMSVSGMNYYACLSILSLLLLTPFAIAVEGPKMWAAGWQTAVSQIGPNFVWWVAAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPIQPNNALGAAIAILGTFLYSQAKQ 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g05507 386 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 94 385 IPR004696 GO:0016020|GO:0022857|GO:0055085
Trre15g05507 386 Pfam Triose-phosphate Transporter family 94 382 IPR004853 -
Trre15g05507 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 135 229 - -
Trre15g05507 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 285 383 - -
Trre15g05507 386 PANTHER SOLUTE CARRIER FAMILY 35 94 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g05507 Trre-Chr15 63732178 63734513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g05507 27 386 Antiporters AT1G61800 78.846 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g05507 K15283 - gmx:100804205 580.096