Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g05463 ATGCTACTAGGATTAGAATATCTTAACTTGTCCAAAACTAGTCTTGTTGGTCACATTCCTGACAAAATCTCAAAACTCGGTAATTTGAATGCACTTGATCTTTCTATGAATCATCTTGATGGGAAAATTCCATTATTGAAGAATAAACACCTCCAAGTTATTGACCTTTCACACAACAATTTGAGTGGACCAGTCCCTTCATCTGTCTCGGAGAATCTCTCAAAGATGAAGAGATACAACTTCTCTTATAATAACTTAACCCTTTGTGCATCAGAAATCAAATCCGATATCCTGCAAACATCGTTCTTTGGATCAGTTAACAGTTGTCCAATAGCTGCGAATCCGAGTCTTTTCAAAAGAAGAAGAGACAGTCACCACAAGGGAATGAAGTTAGCTCTTGTATTGACCCTTGTATTGATATTCGCGCTTGCCGGGATTTTGTTTCTAGCATTCGGTTGCAGAAGGAAACAGAAAATGTGGGAAGTAAAGCCAGGTTCATACAGAGAAGAACAGAATATCTCAGGTCCATTTTCCTTCCAAACTGATTCAACAACTTGGGTGGCTGATGTGAAACAAGCAACATCAGTTCCAGTAGTAATCTTCGAAAAGCCGCTGTTGAATATTACCTTTGCAGATCTCTTATCTGCAACTTCAAATTTCGATAGAGGTACCCTTTTGGCTGAAGGAAAATTTGGACCTGTTTATAGAGGCTTTCTACCCGGAAATATTCATGTTGCGGTTAAAGTTTTGGTTTTTGGTTCTACATTAACAGATGAAGAAGCTGCTAGAGAGCTTGAGTTTCTTGGTAGAATCAAGCACCCTAATCTAGTTCCTTTAACTGGTTATTGTGTAGCTGGTGATCAAAGAATCGCTATATATGATTACATGGAGAATGGAAACTTGCAAAACCTTCTTTATGATTTGCCACTCGGTGTTCAAAGCACAGATGATTGGAGCACGGACACATGGGAAGAAGCTGCTGATAGTAATGGAATTCAAAATGTTGGTTCTGAAGGATTACTCACAACTTGGCGATTTCGACACAAAATCGCTCTTGGAACTGCAAGAGCATTGGCATTTCTTCATCATGGATGCTCTCCTCCAATGATTCACAGAGCTGTTAAAGCTAGCAGTGTTTATTTGGATTATGATTTGGAGCCTAGGTTGTCTGATTTTGGACTTGCAAAGATTTTCGGAAGTGGTTTGGACGATGAGATTGCGCGTGGTTCGCCTGGTTATGTTTCACCGGAGTTCTCTCAGCCGGAATTTGATGACTCTCCTACGCCGAAATCTGATGTATATTGTTTTGGTGTTGTTCTGTTTGAGCTACTAACTGGAAAGAAACCGGTCGGAGATGATTATACCGATGACAAAGAAGCGACAACTTTGGTAAGTTGGGTTAGAGGACTTGTAAGGAAGAATCAAACTTCAAGAGCTATTGATCCTAAAATTCGCGATACAGGATCGGATGAACAAATGGAGGAAGCTCTTAAGATTGGATATCTATGCACAGCTGATTTACCTTTCAAGAGACCAACCATGCAGCAGATAGTTGGACTTCTAAAGGATATTGAACCTACAACTAGTTAG 1590 0.3994 MLLGLEYLNLSKTSLVGHIPDKISKLGNLNALDLSMNHLDGKIPLLKNKHLQVIDLSHNNLSGPVPSSVSENLSKMKRYNFSYNNLTLCASEIKSDILQTSFFGSVNSCPIAANPSLFKRRRDSHHKGMKLALVLTLVLIFALAGILFLAFGCRRKQKMWEVKPGSYREEQNISGPFSFQTDSTTWVADVKQATSVPVVIFEKPLLNITFADLLSATSNFDRGTLLAEGKFGPVYRGFLPGNIHVAVKVLVFGSTLTDEEAARELEFLGRIKHPNLVPLTGYCVAGDQRIAIYDYMENGNLQNLLYDLPLGVQSTDDWSTDTWEEAADSNGIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPMIHRAVKASSVYLDYDLEPRLSDFGLAKIFGSGLDDEIARGSPGYVSPEFSQPEFDDSPTPKSDVYCFGVVLFELLTGKKPVGDDYTDDKEATTLVSWVRGLVRKNQTSRAIDPKIRDTGSDEQMEEALKIGYLCTADLPFKRPTMQQIVGLLKDIEPTTS 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g05463 529 Gene3D Ribonuclease Inhibitor 1 119 IPR032675 -
Trre15g05463 529 FunFam Putative LRR receptor-like serine/threonine-protein kinase 181 295 - -
Trre15g05463 529 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 4 524 - -
Trre15g05463 529 ProSiteProfiles Protein kinase domain profile. 220 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g05463 529 Gene3D Phosphorylase Kinase; domain 1 180 295 - -
Trre15g05463 529 SUPERFAMILY Protein kinase-like (PK-like) 197 521 IPR011009 -
Trre15g05463 529 SUPERFAMILY L domain-like 3 88 - -
Trre15g05463 529 Gene3D Transferase(Phosphotransferase) domain 1 296 529 - -
Trre15g05463 529 Pfam Protein tyrosine and serine/threonine kinase 224 519 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g05463 Trre-Chr15 63500539 63502128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g05463 5 528 Receptor kinase-like Gene Family AT1G55610 35.782 2.01e-86 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Trre15g05463 PK_Tyr_Ser-Thr 4.4e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g05463 - - gmx:100797738 910.212