Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre15g05460 | ATGGCTGAGCATCGAGACTCCGAAGCTCTCCCAAAAGGAAATTGTTCAGAAAGTAACGATGAACAAAAAGCTGAAGAGATAAAGGAACGAGTCGCTGAATCACCGCCAGCCACCGAGTCGCGGAAAGACGATTTACCGAATTCTATAGAGCATAATTCAGAAACCCTAATTGCTTTTCCATCTTCAGTTTTGCAGAATCAAAGTATCGTTGCAGATTTGCAAGGGAGCTCTAATACGACTGTGAATTCGGGTGTCAAAGCTGAAACTAAGGAAACAGTTGGACCTCCTGAAAAGGAAATTACTGCAAGACAAGAAGCCCAAACACCCCCAACTCAGACCGGAAATCAGCTTCAGTTGACTGTGTTAAAATCAGCTCCATTGTCTGAAGTATCATCACCAAATTTTGTTACAAACTCTGTATCATCTGTTCCTAGTCCAACCATGGGAATAGAGAAAATGTCTACTCCAAATGTTAGTAATATGCTTGTGCTTTCTGGGGCTAAAGCTAAACCCTTATCTTCTGTTAGTGTTCCAAGGACACCATCATCTGATGGATACAACTGGCGGAAATATGGTCAGAAGCAAGTTAAGAGTCCTACTACAAGTTCTCGAAGCTATTACAGGTGTACTCAATCAAACTGTTTTGCTAAGAAGATTGAGTGTTGGGATCATTCAGGTCATGTGATAGAGACTGTTTATAGAAGTGAGCATAGTCATGATCCCCCACGAAAGATAAATTCCATTAGGGAAAGTAAGTTTGCACCTTCTAATGAACCTACTGCAGAGAACAGTGTTTTAGCGAAGCCTGTCAGTGTTCCAAAAGAATCTGACCCATCCACGTCTTCCAAAGCTCAAGAAGAAGCTCCTTGTGGTACTGACAAGAAACCACAAAACTCATCTAATATCAATGGTAATGGTAAAGTTATTTTAAAGGAGGAACATCTTGACGAGCCAGAGCCAAAACGAAGAAAGGAGAAAGAAGACTTAATTCACTCAGATTCTCCCGTAAATCCTGGAAAGAAACCCAAGTATGTTGTACATGCAGCAGGAGATGTGGGGATATCAGGGGATGGATACCGATGGCGCAAGTATGGACAGAAAATGGTGAAGGGTAACCCACATCCCAGAAACTACTATAGATGCACTTCTGCTGGATGTCCTGTCCGGAAGCACATTGAGACTGCCGTAGACAACTCAGATGCTGTCATCATAACTTACAAGGGTGTACATGATCACGACACTCCTGTGCCTAAGAAACGACATGGCCCACCAAGTGCTCCTCTTGTGGCTGCTGCAGCACCTGTTTCCATGAATAATTTGCAGTTGACTAAACCGGACTCGCCGCAAAATCAGAAAGTTTCTACTCAATGGTCGGTGGACAAAGAAGGAGAACTAACTGGGGAAGCCATGGAGCTCGGGGGTGAGAAAGCAATAGAGTCAGCTAAAACCCTTCTGAGCATAGGTTTTGAAATTAAGCCTTGCTGA | 1485 | 0.433 | MAEHRDSEALPKGNCSESNDEQKAEEIKERVAESPPATESRKDDLPNSIEHNSETLIAFPSSVLQNQSIVADLQGSSNTTVNSGVKAETKETVGPPEKEITARQEAQTPPTQTGNQLQLTVLKSAPLSEVSSPNFVTNSVSSVPSPTMGIEKMSTPNVSNMLVLSGAKAKPLSSVSVPRTPSSDGYNWRKYGQKQVKSPTTSSRSYYRCTQSNCFAKKIECWDHSGHVIETVYRSEHSHDPPRKINSIRESKFAPSNEPTAENSVLAKPVSVPKESDPSTSSKAQEEAPCGTDKKPQNSSNINGNGKVILKEEHLDEPEPKRRKEKEDLIHSDSPVNPGKKPKYVVHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNSDAVIITYKGVHDHDTPVPKKRHGPPSAPLVAAAAPVSMNNLQLTKPDSPQNQKVSTQWSVDKEGELTGEAMELGGEKAIESAKTLLSIGFEIKPC | 494 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre15g05460 | 494 | MobiDBLite | consensus disorder prediction | 309 | 334 | - | - | |
Trre15g05460 | 494 | ProSiteProfiles | WRKY domain profile. | 183 | 242 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Trre15g05460 | 494 | MobiDBLite | consensus disorder prediction | 250 | 264 | - | - | |
Trre15g05460 | 494 | MobiDBLite | consensus disorder prediction | 73 | 87 | - | - | |
Trre15g05460 | 494 | MobiDBLite | consensus disorder prediction | 233 | 247 | - | - | |
Trre15g05460 | 494 | MobiDBLite | consensus disorder prediction | 233 | 343 | - | - | |
Trre15g05460 | 494 | MobiDBLite | consensus disorder prediction | 73 | 116 | - | - | |
Trre15g05460 | 494 | SUPERFAMILY | WRKY DNA-binding domain | 178 | 242 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Trre15g05460 | 494 | MobiDBLite | consensus disorder prediction | 18 | 49 | - | - | |
Trre15g05460 | 494 | MobiDBLite | consensus disorder prediction | 274 | 306 | - | - | |
Trre15g05460 | 494 | MobiDBLite | consensus disorder prediction | 1 | 53 | - | - | |
Trre15g05460 | 494 | FunFam | WRKY transcription factor | 343 | 416 | - | - | |
Trre15g05460 | 494 | ProSiteProfiles | WRKY domain profile. | 350 | 415 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Trre15g05460 | 494 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 126 | 452 | IPR044810 | GO:0003700 | |
Trre15g05460 | 494 | SMART | WRKY_cls | 355 | 414 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Trre15g05460 | 494 | SMART | WRKY_cls | 182 | 241 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Trre15g05460 | 494 | Pfam | WRKY DNA -binding domain | 357 | 412 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Trre15g05460 | 494 | Pfam | WRKY DNA -binding domain | 184 | 239 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Trre15g05460 | 494 | SUPERFAMILY | WRKY DNA-binding domain | 351 | 415 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Trre15g05460 | 494 | Gene3D | WRKY domain | 172 | 243 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Trre15g05460 | 494 | Gene3D | WRKY domain | 340 | 416 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre15g05460 | Trre-Chr15 | 63479546 | 63483800 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre15g05460 | 172 | 494 | WRKY Transcription Factor Family | AT4G30935 | 60.429 | 7.21e-125 | 370 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Trre15g05460 | WRKY | 2.2e-23 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre15g05460 | - | - | mtr:11440414 | 707.212 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Trre15g05460 | 15 | 63479546 | 63483800 | Trre15g05460 | 15 | 63479546 | 63483800 | ECH |