Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g05452 ATGAACATTATGGTTTCTTCTCCAATATTGTTGATTACCATTTTCTCAATTTGGCTTCTAATTTCCTGCTCCGAATCCAAAGAATATATTGTTGGTGTACGTGACCGTGATGGTAAAAAATCATGGAGGTTTCCTCTTCCATCGTTTCATGCATTCACCAACTGGTCCTCTACTCATCAATTCACAATTGGCGATACTATCGTGTTTGAGTACGATAGGATGAAAGAATCAGTGCATGAAGTGAATGAACATGACTATATAAAGTGTAATACAAGGGGACATAATCACATCAATTACTACCACAGTGGCTATAGCAAGGTTGTGCTTGATAAATCAGGAGTACGCTATTTCATAAGTGGAAGAAAAGCTCATTGCAAAATGGGATTAAAGGTAGCAGTCATAACTCTCATGCCTTTATTAGTTTCACCACCGTCTTCTCCGCCGTCACCTTCACTATCGCCATCATTGTCACCCTCGCCTTTTTCAACACCTTCACCATCACCATCACCATCATTGTCACCCTCGCCTTTTCCAACACCTTCACCATCACCTTCGCCAAATTCATCGAGTAGTAATGGTGTTGCTATTGGTCGAGAATTCGTCATGTGGTTCGGGATTTTAATTTATTGGCTATGA 636 0.4041 MNIMVSSPILLITIFSIWLLISCSESKEYIVGVRDRDGKKSWRFPLPSFHAFTNWSSTHQFTIGDTIVFEYDRMKESVHEVNEHDYIKCNTRGHNHINYYHSGYSKVVLDKSGVRYFISGRKAHCKMGLKVAVITLMPLLVSPPSSPPSPSLSPSLSPSPFSTPSPSPSPSLSPSPFPTPSPSPSPNSSSSNGVAIGREFVMWFGILIYWL 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g05452 211 CDD Phytocyanin 27 133 - -
Trre15g05452 211 ProSiteProfiles Phytocyanin domain profile. 27 137 IPR003245 GO:0009055
Trre15g05452 211 Pfam Plastocyanin-like domain 50 128 IPR003245 GO:0009055
Trre15g05452 211 MobiDBLite consensus disorder prediction 148 185 - -
Trre15g05452 211 SUPERFAMILY Cupredoxins 26 135 IPR008972 -
Trre15g05452 211 FunFam Cupredoxin superfamily protein 26 138 - -
Trre15g05452 211 MobiDBLite consensus disorder prediction 148 192 - -
Trre15g05452 211 Gene3D - 26 137 IPR008972 -
Trre15g05452 211 PANTHER BLUE COPPER PROTEIN 28 153 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g05452 Trre-Chr15 63430322 63431071 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g05452 12 162 Phytocyanin Superfamily AT2G25060 38.562 2.73e-29 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g05452 - - tpra:123906923 221.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g05452 15 63430322 63431071 Trre15g05452 15 63430322 63431071 ECH