Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g05451 ATGGCTTCTTCTTCTTCTCCAATATTGTTGATTATCATTTTCTCAATATTGTCTCTGCTAATTTCATGCTCTGAATCCACAGAGCATATGGTTGGAGACGATCAATTTGTTTGGAAGGTTCCTCTTTCATCACCAGATGATCTCACTCTATGGTCCTCTTCTCACAATTTCACAGTCGGAGATACTATCGTTTTTCGGTACAATACACGAAGAGAATCGGTTCGAGAAGTGATGAATGAGCATGACTTTATAAAGTGTAATACAAAGGGACAATTTATGAGATTGGGGCACGATGGATATACTAGAGTGGTGCTTGATAAACCAGGAATACACTATTTCATGAGTGGATGGAAGAGTCATTGCAAGAGGGGATTAAAGGTAGCTATTTTGGTCATTTCTCCCACAAATAATAATGAGCCTTTAGTTTCCATGACTCCGCTAATTCGGCCGTCACTGACACTGCCTCGGCATTCGCCTAAGTCATCGTCACCTTCACCTTCACCTTCACTTTCGCCATCGCCATCGCCATCGCCGTCACCAAATTCATCTGGAAGTAAAGGTGGTGCTATTGGCTGTGGATTCATAATATTGTTGGGTGTTTCATTGATGACTATGATGATGTTCTTAATTTAA 633 0.4092 MASSSSPILLIIIFSILSLLISCSESTEHMVGDDQFVWKVPLSSPDDLTLWSSSHNFTVGDTIVFRYNTRRESVREVMNEHDFIKCNTKGQFMRLGHDGYTRVVLDKPGIHYFMSGWKSHCKRGLKVAILVISPTNNNEPLVSMTPLIRPSLTLPRHSPKSSSPSPSPSLSPSPSPSPSPNSSGSKGGAIGCGFIILLGVSLMTMMMFLI 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g05451 210 SUPERFAMILY Cupredoxins 25 133 IPR008972 -
Trre15g05451 210 FunFam Cupredoxin superfamily protein 26 137 - -
Trre15g05451 210 CDD Phytocyanin 27 131 - -
Trre15g05451 210 MobiDBLite consensus disorder prediction 161 179 - -
Trre15g05451 210 Gene3D - 24 133 IPR008972 -
Trre15g05451 210 MobiDBLite consensus disorder prediction 152 185 - -
Trre15g05451 210 PANTHER BLUE COPPER PROTEIN 28 148 IPR039391 GO:0009055
Trre15g05451 210 ProSiteProfiles Phytocyanin domain profile. 27 133 IPR003245 GO:0009055
Trre15g05451 210 Pfam Plastocyanin-like domain 38 124 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g05451 Trre-Chr15 63428023 63428807 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g05451 11 208 Phytocyanin Superfamily AT2G25060 34.848 1.07e-25 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g05451 - - tpra:123906925 261.922