Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g05450 ATGAATATGGCTTCTTCTTCTTCTCCAATATTGTTGATTATCATTTTCTCAATATTGTCTCTGCTAATTTCATGCTCTGAATCCACAGAGCATATGGTTGGAGACGATCAATTTGTTTGGAAGGTTCCTCTTTCATCACCAGATGATCTCACTCTATGGTCCTCTTCTCACAATTTCACAGTCGGAGATACTATCGTTTTTCGGTACAATACACGAAGAGAATCGGTTCGAGAAGTGATGAATGAGCATGACTTTATAAAGTGTAATACAAAGGGACAATTTATGAGATTGGGGCACGATGGATATACTAGAGTGGTGCTTGATAAACCAGGAATACACTATTTCATGAGTGGATGGAAGAGTCATTGCAAGAGGGGATTAAAGGTAGCTATTTTGGTCATTTCTCCCACAAATAATAATGAGCCTTTAGTTTCCATGACTCCGCTAATTCGGCCGTCACTGACACTGCCTCGGCATTCGCCTAAGTCATCGTCACCTTCACCTTCACCTTCACTTTCGCCATCGCCATCGCCATCGCCGTCACCAAATTCATCTGGAAGTAAAGGTGGTGCTATTGGCTGTGGATTCATAATATTGTTGGGTGTTTCATTGATGACTATGATGATGTTCTTAATTTAA 639 0.4069 MNMASSSSPILLIIIFSILSLLISCSESTEHMVGDDQFVWKVPLSSPDDLTLWSSSHNFTVGDTIVFRYNTRRESVREVMNEHDFIKCNTKGQFMRLGHDGYTRVVLDKPGIHYFMSGWKSHCKRGLKVAILVISPTNNNEPLVSMTPLIRPSLTLPRHSPKSSSPSPSPSLSPSPSPSPSPNSSGSKGGAIGCGFIILLGVSLMTMMMFLI 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g05450 212 FunFam Cupredoxin superfamily protein 28 139 - -
Trre15g05450 212 PANTHER BLUE COPPER PROTEIN 30 150 IPR039391 GO:0009055
Trre15g05450 212 CDD Phytocyanin 29 133 - -
Trre15g05450 212 MobiDBLite consensus disorder prediction 163 181 - -
Trre15g05450 212 ProSiteProfiles Phytocyanin domain profile. 29 135 IPR003245 GO:0009055
Trre15g05450 212 MobiDBLite consensus disorder prediction 154 187 - -
Trre15g05450 212 SUPERFAMILY Cupredoxins 27 135 IPR008972 -
Trre15g05450 212 Gene3D - 26 135 IPR008972 -
Trre15g05450 212 Pfam Plastocyanin-like domain 40 126 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g05450 Trre-Chr15 63428017 63428807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g05450 13 210 Phytocyanin Superfamily AT2G25060 34.848 1.14e-25 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g05450 - - tpra:123906925 265.388