Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g05439 ATGCCTTCACGTTGTGAAATTTGCTGTGAGATTTTGATCGCTGTCTTGCTCCCTCCATTGGGTGTTTGTCTCCGCCATGGTTGCTGCACTGTTGAATTCATCATTTGCTTGCTCCTTACAATACTAGGTTATATTCCTGGTATAATCTATGCTCTTTATGCAATTATCTTTGTTGATCGTGATCAGTACTTTGATGAATATAGGCGTCCTTTGTATTCACAATCACAATACTAG 234 0.3932 MPSRCEICCEILIAVLLPPLGVCLRHGCCTVEFIICLLLTILGYIPGIIYALYAIIFVDRDQYFDEYRRPLYSQSQY 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g05439 77 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 4 59 IPR000612 GO:0016020
Trre15g05439 77 ProSitePatterns Uncharacterized protein family UPF0057 signature. 12 27 IPR000612 GO:0016020
Trre15g05439 77 Pfam Proteolipid membrane potential modulator 8 55 IPR000612 GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g05439 1 75 RCI2 Gene Family AT4G28088 78.947 3.35e-41 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g05439 - - gmx:100306426 152.14