Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g05435 ATGCAGCAAGGTGATCAAACGGTTCTTAGCTTGAGGCCTGGTGGTGGTCGAGGAAACAGGCTTCTCGCTCCTAGATTTGATTCTTCCTCCTCCAACTCATCGGGAGGACCTGCTCCTACTCTAGTCAAAGCTGAGGTACCATGGTCTGCTAGAAGGGGAAGTCTCTCTGACAAGGATCGTGTCTTAAAGACTGTTAAAGGGATACTAAACAAGTTGACTCCTGGGAAATTTGATCTTCTGAAGGGTCAGTTGATCGATTCTGGAATTACATCAGCTGATATATTGAAGGGAGTTATTTCATTGATATTTGACAAGGCTGTGCTAGAACCAACATTCTGCCCCATGTATGCTCAGCTGTGTTCTGATCTTAATGAAAAGCTGCCTCCATTCCCATCTGAAGAACCTGATGGGAAAGAAATAACTTTTAAGAGAGTACTCTTGAATAACTGCCAGGAAGCTTTTGAAGGTGCTGGTAAACTGAGGGAAGAATTGGCGCAGATGACTTCCCCTGAGCAGGAGTCGGAGCGACGTGACAAGGAAAGACTTGTCAAAATTCGTACCCTAGGAAACATTCGTTTAATCGGTGAGCTGCTGAAGCAAAAAATGGTTCCTGAAAAGATTGTCCATCACATTGTTCAGGAGCTTTTAGGGCCTTCTGACAGCAAGGAGGTCTGTCCGGCTGAGGAAAATGTTGAAGCCATTTGTCATTTTTTCAACACTATTGGCAAGCAGCGCATAAATGATATTTACTTTAAACGGTTGAGAGAATTGAGCACCAATCCTCAACTTGTACCGCGGATGAGATTCATGGTTCGTGATGTTATAGATTTGTCAATTATACCATTTGTCAATTATTTATATCTTTTTCAATAA 873 0.4273 MQQGDQTVLSLRPGGGRGNRLLAPRFDSSSSNSSGGPAPTLVKAEVPWSARRGSLSDKDRVLKTVKGILNKLTPGKFDLLKGQLIDSGITSADILKGVISLIFDKAVLEPTFCPMYAQLCSDLNEKLPPFPSEEPDGKEITFKRVLLNNCQEAFEGAGKLREELAQMTSPEQESERRDKERLVKIRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPSDSKEVCPAEENVEAICHFFNTIGKQRINDIYFKRLRELSTNPQLVPRMRFMVRDVIDLSIIPFVNYLYLFQ 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g05435 290 Pfam MIF4G domain 62 277 IPR003890 GO:0003723|GO:0005515
Trre15g05435 290 SMART if4_15 62 281 IPR003890 GO:0003723|GO:0005515
Trre15g05435 290 FunFam Eukaryotic translation initiation factor isoform 4G-2 53 280 - -
Trre15g05435 290 MobiDBLite consensus disorder prediction 1 43 - -
Trre15g05435 290 Gene3D - 54 279 - -
Trre15g05435 290 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 31 277 IPR045208 GO:0003743
Trre15g05435 290 MobiDBLite consensus disorder prediction 24 38 - -
Trre15g05435 290 SUPERFAMILY ARM repeat 56 277 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g05435 Trre-Chr15 63350326 63352751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g05435 30 277 Eukaryotic Initiation Factors Gene Family AT5G57870 78.125 1.09e-130 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g05435 K03260 - gmx:100781275 438.343