Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g05374 ATGCTTTCTAGATCTTGTTTAGGTTTACTTAATCATCAACTATCACTAAACAACAACGATGATGATTACCAAAACATAAACACCGTTCAAGAATTCATCACAACGTTAAACGAGGAACAATATTCAAACAACGTTGTTTCAGTTTCAGTTCCTTCATCACCAATTCCTCGTAAACAAAGAATGATTATAGTATCAAACCAGTTACCAATACGCGTCGTTTCATCTTCTTTCAACGACGAAAACAACAACAACACCTTCAAATTTGAATGGGATGTTGATAGCATAACGTTTCAGCTCAAAGAAGGTTTATCTTCTGATTCTCAAGTGTTTTACGTTGGTTCTTTGAAAACACAAATTGAAATTGAACCGTCACAACAAGAAGAAATTGCCAAGATTCTGTTACATGAGTTTCGTTGTGTTCCAACTTTTTTACCTACAGAGATTCATAGTGGTTTCTACCATGGTTTCTGTAAGCATTATCTTTGGCCTCTGTTTCACTATATGCTTCCTGTAACAAAGAGTCAAGGTGCACGTTTTGATGATTCTCAGTGGCGTGCTTATGTTACTGCAAATAGAATCTTCGCCGACAAGGTACGAGAAATTCTTAACGCTGATGAGGATTATGTTTGGGTTCATGATTATCATCTTATGATTTTGCCAACTTATTTGAGGAAACGTTTTCCTAAAGTGAAATTGGGTTTTTTTCTTCATAGTACTTTTCCAACTTCGGAAATTTATAGAACAATACCTATTCGTGAGGATATTTTGAGGGGTTTGTTGAATTGTGATTTAATTGGGTTTCATACTTTTGATTATGCAAGACATTTTTTGTCTTGTTGTAGTAGAATGTTGGGTTTGGATTATGAGTCTAAAAGAGGTTACATTGGACTTGATTACTTTGGTAGAAATGTTACAATCAAGATTCTTCCTGTGGGGATTCATATGGGTCTTCTCGAATCGGTTTTGTCGTTGTCTGATACTGCTAAGAGGGTGAAGGAGTTGAAGGAAGAGTATGAAGGGAAAGATGTGATTTTGGGGGTTGATGATATGGATTTGTTTAAAGGTATTGGGTTGAAGTTTTTGGCATTGGGGAAGCTTTTGGAGGATAATGAAAAATTATGGGGTCAAGTTGTGTTGGTTCAGATTCTGAATCAAGCGAGGAGTAGCGGAAAAGATATTCAGGATTTGAAGTTTGAGATCGAAGCGATTGCTAAGGAGGTTAATGATGAGTATGGTGATGAACAATCTGGGTATAGGCCAATTGTTTGTATAAATGGTCCGGTTTCGACTCAGGAGAAGGCTGCATACTATGCTATATCGGAATGTTGTATTGTGAATGCTGTGAGAGATGGGATGAATTTGATGCCTTATGAGTATACTGTTTGCAGACAAGGAAGTGCTAAATTGGACAAAGCACTTGAGGTGGAAAAAGATGATGATAAAAAGAGTGTTATTATTGTTTCTGAGTTCATTGGTTGTTCGCCTTCGCTCAGCGGTGCAATTCGGGTGAATCCGTGGAATATTGACGATGTTTCTGAGAAAATGAACTCTGCAATAAAAATGCCGGATTCTGAGAAGCAATTGCGGCACAAGAAGAATTATAAGTACATAAGCTCTCATGATGTAGCGTATTGGGCTAAGAGTTTTGATCAGGATTTAGAGAGAGCTTGTAGGGAGCATTATCTCAAGATATATGTTGGATTAGGACTTGATCATTTTAGAGTCATTGCTTTGGATCCTAGTTTTAAGAAGCTTTGTCTTGATGACATTGTCCCTGCTTACAGAGATACAAAGAGTAGATTGATCCTTTTGGATTATGATGGCACCATGATGCCTCAGGGATCAACAAACAAAGCTCCAAGTTCTGTTGTTATCAATCTCTTGAATTCCTTATGCAGTGATCCCAAAAATAAAGTGTTCATTGTTAGTGGCAGGGGTAGAGTTTGCCTTAGTGACTGGTTTTCCCCATGCGACAAATTGGGTCTCTCTGCAGAACATGGTTACTTCACTAGGTGGAGTAAGGATTCTCTTTGGACGACTTGCGGATTGGCATCAGATTTTGATTGGAAAATTAATGTAGAAAAGGTGATGTCGCTTTATACAGAAGCAACTGATGGTTCCTTCATTGAAGAAAAGGAAAGTGCAATGGTTTGGCAACATCAAGAAGCAGATCCTGATTTTGGACTGTGGCAAGCTAAAGAGCTTCTTGTTCACCTTGAGAGTATGTTGGCCAATGATCCTGTAGTAGTTAAAAGGGGACAGCATATAGTTGAAGTAAAGCCTCAGGGTGTGAGCAAAGGTAAAGTAGTGGAAGAGCTTATATCAACCATGAGGAATGAAGGGAATTCACCAGATTTTCTCCTATGCATAGGTGATGATAGATCAGATGAAGATATGTTTGAAAGCATTGCTAATTTAGCTTTATCAACCATATCACAAGTTTTTGCATGCACTATTGGTTTTAAACCAAGCAGGGCTAAATACTATTTGGATGATACCGGTCATGTTATCAATCTGCTCGAAGGACTTGCCGCTACATCAGCAGCAGATTAG 2553 0.3811 MLSRSCLGLLNHQLSLNNNDDDYQNINTVQEFITTLNEEQYSNNVVSVSVPSSPIPRKQRMIIVSNQLPIRVVSSSFNDENNNNTFKFEWDVDSITFQLKEGLSSDSQVFYVGSLKTQIEIEPSQQEEIAKILLHEFRCVPTFLPTEIHSGFYHGFCKHYLWPLFHYMLPVTKSQGARFDDSQWRAYVTANRIFADKVREILNADEDYVWVHDYHLMILPTYLRKRFPKVKLGFFLHSTFPTSEIYRTIPIREDILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLDYFGRNVTIKILPVGIHMGLLESVLSLSDTAKRVKELKEEYEGKDVILGVDDMDLFKGIGLKFLALGKLLEDNEKLWGQVVLVQILNQARSSGKDIQDLKFEIEAIAKEVNDEYGDEQSGYRPIVCINGPVSTQEKAAYYAISECCIVNAVRDGMNLMPYEYTVCRQGSAKLDKALEVEKDDDKKSVIIVSEFIGCSPSLSGAIRVNPWNIDDVSEKMNSAIKMPDSEKQLRHKKNYKYISSHDVAYWAKSFDQDLERACREHYLKIYVGLGLDHFRVIALDPSFKKLCLDDIVPAYRDTKSRLILLDYDGTMMPQGSTNKAPSSVVINLLNSLCSDPKNKVFIVSGRGRVCLSDWFSPCDKLGLSAEHGYFTRWSKDSLWTTCGLASDFDWKINVEKVMSLYTEATDGSFIEEKESAMVWQHQEADPDFGLWQAKELLVHLESMLANDPVVVKRGQHIVEVKPQGVSKGKVVEELISTMRNEGNSPDFLLCIGDDRSDEDMFESIANLALSTISQVFACTIGFKPSRAKYYLDDTGHVINLLEGLAATSAAD 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g05374 850 CDD HAD_TPP 601 833 - -
Trre15g05374 850 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 729 850 - -
Trre15g05374 850 Gene3D Glycogen Phosphorylase B; 50 326 - -
Trre15g05374 850 Pfam Glycosyltransferase family 20 60 554 IPR001830 GO:0003824|GO:0005992
Trre15g05374 850 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 558 - -
Trre15g05374 850 Gene3D - 599 716 IPR023214 -
Trre15g05374 850 Gene3D - 730 850 IPR023214 -
Trre15g05374 850 Pfam Trehalose-phosphatase 603 832 IPR003337 GO:0003824|GO:0005992
Trre15g05374 850 CDD GT20_TPS 60 554 IPR001830 GO:0003824|GO:0005992
Trre15g05374 850 Gene3D Glycogen Phosphorylase B; 327 539 - -
Trre15g05374 850 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 44 844 IPR001830 GO:0003824|GO:0005992
Trre15g05374 850 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 599 716 - -
Trre15g05374 850 FunFam Alpha,alpha-trehalose-phosphate synthase 321 538 - -
Trre15g05374 850 NCBIfam HAD-IIB family hydrolase 601 802 IPR006379 -
Trre15g05374 850 NCBIfam trehalose-phosphatase 598 843 IPR003337 GO:0003824|GO:0005992
Trre15g05374 850 FunFam Trehalose-6-phosphate synthase 8 55 320 - -
Trre15g05374 850 FunFam Trehalose-6-phosphate synthase 2 683 762 - -
Trre15g05374 850 SUPERFAMILY HAD-like 600 844 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g05374 Trre-Chr15 62815530 62818580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g05374 58 847 Trehalose Biosynthesis Gene Families AT2G18700 65.283 0.0 1089
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g05374 K16055 - gmx:100810498 1231.47