Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g05281 ATGAGGTATATTAGGACAAACAGCTTCAAGAGATTCTTCTCATTCAAAAAACGTGGTTTAGGTGAACAAGAACTTAATTCTAAAGATGAAGAAAAAGATAACAGCTTGAAGATTCTTCCATATGAAGAAGAATCTTGTCAAAGACCAACTTGGAAATGTTTCTCTTATGAAGAGTTGTTTGAAGCTACCAACGGCTTCATCTCAGAAAACATTGTTGGAAAAGGAGGGTATGCAGAAGTTTACAAAGGAATATTGAAAAATGGTGAAGAAATTGCTGTGAAGAGATTAACAAGAACTTCAAAAGATGAAAGAAAAGAGAAAGAGTTTTTGACAGAGATTGGTACAATTGGACATGTTCGTCATTCCAATGTATTGTCTCTTCGAGGATGTTGTATTGACAATGGACTTTACTTTGTTTTTGAACTATCAACAACTGGTTCTGTTTCATCTATTCTTCATGATGAAAAGTTGGATCCTTTAGATTGGAAAACAAGACATAAAATAGTTCTTGGAACAGCGCGTGGACTTCACTACTTGCATAAAGGTTGCAAAAGGAGAATAATCCATAGAGATATCAAAGCATCAAACATTTTGTTGACAAAAGATTTTGAACCACAGATATCTGATTTTGGACTAGCAAAATGGCTTCCATCTCAATGGACTCATCATTCAATTGCTCCAATAGAAGGGACATTTGGACATTTGGCACCAGAATACTACTTGCATGGAGTGGTGGATGAGAAAACAGATGTATTTGCCTTTGGTGTGTTTTTGCTAGAAGTCATTTCTGGTAGGAAACCTGTTGATGGGTCTCACCAAAGCTTACATAGCTGGGCTAAACCAATTTTGAACAAGGGTGAGATAGAAGAGCTGGTAGATGCAAGGCTTGAAGGGGCTTATGATATGGCACAGTTGATGAGATTTGCCTTTGCTGCTTCTCTTTGTATTCGGGCATCTTCCACTTGGCGACCTAACATGACTGAGATATTGGAAATACTGGAGGAGGGAGAGATGGATAAAGAGAAGTGGAAAATGCCAGAGGAAGAAGAAGAACAAGAGGAAGAATTTTGGGGTTTTGAGGATCTAGAATATGAATATGACACTTCCTTTTCAATGTCTTTAATTGATTCAATTGAAAGTAATTAG 1146 0.37 MRYIRTNSFKRFFSFKKRGLGEQELNSKDEEKDNSLKILPYEEESCQRPTWKCFSYEELFEATNGFISENIVGKGGYAEVYKGILKNGEEIAVKRLTRTSKDERKEKEFLTEIGTIGHVRHSNVLSLRGCCIDNGLYFVFELSTTGSVSSILHDEKLDPLDWKTRHKIVLGTARGLHYLHKGCKRRIIHRDIKASNILLTKDFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYYLHGVVDEKTDVFAFGVFLLEVISGRKPVDGSHQSLHSWAKPILNKGEIEELVDARLEGAYDMAQLMRFAFAASLCIRASSTWRPNMTEILEILEEGEMDKEKWKMPEEEEEQEEEFWGFEDLEYEYDTSFSMSLIDSIESN 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g05281 381 FunFam Putative receptor-like serine/threonine-protein kinase 144 358 - -
Trre15g05281 381 PANTHER OS08G0249100 PROTEIN 23 363 IPR046958 -
Trre15g05281 381 Pfam Protein tyrosine and serine/threonine kinase 70 331 IPR001245 GO:0004672|GO:0006468
Trre15g05281 381 Gene3D Phosphorylase Kinase; domain 1 37 141 - -
Trre15g05281 381 ProSiteProfiles Protein kinase domain profile. 66 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g05281 381 SUPERFAMILY Protein kinase-like (PK-like) 43 334 IPR011009 -
Trre15g05281 381 SMART serkin_6 66 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g05281 381 FunFam Putative receptor-like serine/threonine-protein kinase 33 142 - -
Trre15g05281 381 Gene3D Transferase(Phosphotransferase) domain 1 144 359 - -
Trre15g05281 381 ProSitePatterns Protein kinases ATP-binding region signature. 72 94 IPR017441 GO:0005524
Trre15g05281 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g05281 Trre-Chr15 62138952 62144266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g05281 52 344 Receptor kinase-like Gene Family AT1G60800 43.854 1.36e-70 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Trre15g05281 PK_Tyr_Ser-Thr 6.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g05281 - - gmx:100305398 614.764