Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g05264 ATGTCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCAAAAGTAACATTGAAAAGTTGTTACTCTGTGAGACCAATGGAACCAACATGGTGTGGTCGATTACCATTATCCGAATGGGATCAAATTGGAATTATAACACACGTTCCAACAATTTACTTTTATCACCCCCCACAAAACTGGCTCACCCCCTCTACTAAAATCGCCACCACTTTGAAAACCTCATTAAGCAAAGTCCTAGTGCCGTTTTATCCACTAGCCGGTCGTTTACAATGGAAAGAAAACGGTCGTTTTGATATCGAATGCAATGCATTGGGTGTTCAATTCATCGAAGCACAATCTTCGTTAAAATTATCCGAACTAGGTGACTTTTCACCTACTTCTGAATATTACCCTTATTTTATTCCTCACGTTGATTACACCCTCCCAATTCAAGATATTCCTCTAGTTATGGTGCAACTCACACATTTCAAATGTGGTGGTATTAGCATTAGTTTGTTAGTCTCACACGCCGTTGCTGATGGACAAAGTTCGTTGCATTTCTCTAACGAGTGGGCCCGGCTTGCACGGGGTGAGCCTTTGAAAATGGCCCCATTTCTTGATAGAAATGTGTTGCCTTCAAAAAGTTGTAACGATGTTGTTAATGAATCGGAGTTTAATCAACAACCTCCGTTGTTGTTGGGAAATTCGGATAATTTTGAAGAAAGGAAGAAAAAAACAACCGTGGCTATACTTAAAGTGAGTAAAACACAAGTTGAAAAGTTGAAAAAAACAGCCAAAGAGAGTTGGGAGAAACCTAGTAATGGTCGAGGTTATACGAGGTATGAAACGCTAACCGGTCATATTTGGAGAAGTGCATGTAAAGCTAGAGGGCATGGAAATGACCAACCAACCGGGCTCGGTGTTTGTGTTGATTGGAGGAGTCGCGTGGAACCTAATTTACCAAAAGGGTATTTTGGGAATGCAACTTTGGATGTTGTGGCTACTAGTCTTTCAGGTGATTTAATGTCTAAGCCTTTAGGGTATGCTTCAAGTAGGATAAGGGAAGCTATTGAAAAAGTGAATGATGAGTATGTTAGGAAGTGGTTTGAGTATTATAAGAAACAAGAAGATTTTACTAAGTTTCAAGATCTTCGTGAGATGTTAGGGAGTGATGAAAAAGGGCCATTTTATGGGAATCCTAATTTAGGTGTGGTTAGTTGGTTAACATTGCCAATTTATGGACTTGATTTTGGATGGGGGAAAGAGGTTTATATGGGACCAGGAACACATGAAATGGATGGTGATTCTTTGCTTCTTCCTAGTCATGATGATGATGGATTGTTGGTTGCTATTTGTTTGCAAGAGGTTCATATGGATGCCTTCAAGAGGCATTTTTATCAAGACATTGTGTGA 1407 0.3945 MSSSSSSSSSSSSSSSSSKVTLKSCYSVRPMEPTWCGRLPLSEWDQIGIITHVPTIYFYHPPQNWLTPSTKIATTLKTSLSKVLVPFYPLAGRLQWKENGRFDIECNALGVQFIEAQSSLKLSELGDFSPTSEYYPYFIPHVDYTLPIQDIPLVMVQLTHFKCGGISISLLVSHAVADGQSSLHFSNEWARLARGEPLKMAPFLDRNVLPSKSCNDVVNESEFNQQPPLLLGNSDNFEERKKKTTVAILKVSKTQVEKLKKTAKESWEKPSNGRGYTRYETLTGHIWRSACKARGHGNDQPTGLGVCVDWRSRVEPNLPKGYFGNATLDVVATSLSGDLMSKPLGYASSRIREAIEKVNDEYVRKWFEYYKKQEDFTKFQDLREMLGSDEKGPFYGNPNLGVVSWLTLPIYGLDFGWGKEVYMGPGTHEMDGDSLLLPSHDDDGLLVAICLQEVHMDAFKRHFYQDIV 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g05264 468 Gene3D - 14 224 IPR023213 -
Trre15g05264 468 FunFam Tryptamine hydroxycinnamoyl transferase 232 464 - -
Trre15g05264 468 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 27 463 - -
Trre15g05264 468 Pfam Transferase family 19 465 - -
Trre15g05264 468 Gene3D - 233 466 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g05264 Trre-Chr15 62010039 62011445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g05264 19 465 Monolignol Biosynthesis Gene Families AT5G48930 38.667 1.60e-104 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g05264 K13065 - gmx:100777007 609.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g05264 15 62010039 62011445 Trre15g05264 15 62010039 62011445 ECH