Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g05223 ATGAATGAATCCAAATGCGGGATATGTCGACGATTTTTGAAGTCCATTTCATGCGTCATGGATAAGCATCCTATGTATGAAAAATATGGCAATAACACAAGTACATCCTTTTGGGATTCTGAGAATAGCCAGGCTTCTCGAGTAAGAGACGAGGAAGAGTTTCCTTATGGGCATATCTTGGATGCTGCAAACTTGAAAGTTTTTACTTGGGCAGAACTGAAATCAGCTACTAGAAATTTCCGTCCTGAAAATGTGTTAGGAGAGGGTGGGTTTGGTAAAGTATTCAAGGGTTTGATAAAGGAGGGAGCAGAATCAAAAAAAGGTGGGGGTTTGACTATTGCGATCAAGATATTGAATTCTCACAGTTCGCAAGGATTTGCAGAATGGCAGTCAGAGGTGAATTTCTTAGGAAGGCTTTCTCATCCCAACCTCGTAAAGCTGTTGGGATTTGGGCGTGAGGATGGTAAGCTATTTCTCGTGTATGAATTCATGCCCCGCGGTAGTTTGGATAACCACCTATTTGGAAGAGGTTCAAATGTTCGGCCACTTTCATGGGACAAAAGGCTGAAAGTTATAATTGGAGCAGCTAGGGGACTAAATTTCCTTCACTCGGAGAAAATTATACACAGAGATTTTAAGCCCTCAAATATACTACTTGACAAGGCATACACAGCCAAGTTATCAGACTTTGGCTTGGCCAAATCTGGTCCTTCCGATGATCACACTCACGTATCAACACGGGTTGTGGGAACAGGCATTTATGCTGCCCCGGAGTACATGGTCACAGGTCATTTGTATGTGAAAAGTGATGTATATGGATTTGGGCTTGTTTTGGTGGAGGTATTAACAGGTAAGCGGATAGGGGAGATACTACGCATTAGTGAGCGAAAGTCCTTATGTGATTGGCTCAAATCAAACCTATTAAATAGAGCGAAATCGAGAAGCAACATGGATCCAAAGTTGGAGGGCAAGTATCCACCCAACTTAGCTTCGCAAGTAGCTCAACTTGCTCTCAAATGCATCCAAACAGAGCACAAAGTTAGGCCATCAATGAAGGAAGTTGTTGAAACATTGGAAATGATTGAAGCAGCAAATGATAAACCAACTGATAACAGAAAAAGGACCAGTAATTCCAGGGAAGTTCAACTACATGGCCAACCAGACGGTGGTTAA 1173 0.4228 MNESKCGICRRFLKSISCVMDKHPMYEKYGNNTSTSFWDSENSQASRVRDEEEFPYGHILDAANLKVFTWAELKSATRNFRPENVLGEGGFGKVFKGLIKEGAESKKGGGLTIAIKILNSHSSQGFAEWQSEVNFLGRLSHPNLVKLLGFGREDGKLFLVYEFMPRGSLDNHLFGRGSNVRPLSWDKRLKVIIGAARGLNFLHSEKIIHRDFKPSNILLDKAYTAKLSDFGLAKSGPSDDHTHVSTRVVGTGIYAAPEYMVTGHLYVKSDVYGFGLVLVEVLTGKRIGEILRISERKSLCDWLKSNLLNRAKSRSNMDPKLEGKYPPNLASQVAQLALKCIQTEHKVRPSMKEVVETLEMIEAANDKPTDNRKRTSNSREVQLHGQPDGG 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g05223 390 Pfam Protein tyrosine and serine/threonine kinase 83 358 IPR001245 GO:0004672|GO:0006468
Trre15g05223 390 FunFam Serine/threonine-protein kinase BIK1 46 163 - -
Trre15g05223 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Trre15g05223 390 ProSiteProfiles Protein kinase domain profile. 80 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g05223 390 PANTHER OS01G0588500 PROTEIN-RELATED 44 362 - -
Trre15g05223 390 Gene3D Transferase(Phosphotransferase) domain 1 164 384 - -
Trre15g05223 390 MobiDBLite consensus disorder prediction 363 390 - -
Trre15g05223 390 ProSitePatterns Protein kinases ATP-binding region signature. 86 116 IPR017441 GO:0005524
Trre15g05223 390 Gene3D Phosphorylase Kinase; domain 1 64 163 - -
Trre15g05223 390 SUPERFAMILY Protein kinase-like (PK-like) 60 360 IPR011009 -
Trre15g05223 390 MobiDBLite consensus disorder prediction 363 379 - -
Trre15g05223 390 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 164 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g05223 Trre-Chr15 61632975 61634950 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g05223 66 366 Glycoside Hydrolase AT3G07070 42.763 5.76e-81 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Trre15g05223 PK_Tyr_Ser-Thr 3.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g05223 - - gmx:100813304 549.666