Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g05202 ATGGATATGGTTTTAGCACTGATGTTGCAGCTGTTGAAGTTCTGCATCATCTTTGGCTTTGCTGTGGCATCCAAAGGACTTGTTATATCTCCATCTCCAGAAAACTTGCATGTGTATCCATCCCCTATTGAAACACCTGGTTCTTCCCACCAAAAAGATTCACATAGCACCATTTCTCCTAGCTCTCCAACAATACACAATGGGCCATTCTCTCATCCTCAAATAGCATTATCACCACCATCTGTAAAAGCAAGTCCACCACCAAGGAAAGCTCCTGTTGTTAGGCCTCCTGTCTCAACACCAACTGCCCCAGCATCTATTTCCTCTCCCATATCCACTCCTTCACGAATCATCAATCCGGGAAATGGAAGAGCACCGATTGCTGCACCTTTTTACAAAACACCAAAGCCATTTCCACATGTAATACATTCTCCTGCATTGACACCTTCCGCCTCAAATTATAAACATCATCATTCAAGACACATAATTACCATACCTGCTCCTGCATCATCGTATATGGTTTCTCCTACAATTTCAAGACCCCGAGATAGAGAAATTTCTCCCTCATTATCACCAGCAACAGGTAGAAAGAGACATCATTTTCCACTACCATTTAACTCAGACTGTTTATCAACTGTCTGCACAGAGCCTTATGTAACTTCTCCTCTTGGAGCACCTTGCAGATGTGTCTGGCCCATACATGTCGGTCTTCGCCTTAGCGTTTCTCTTTATACCTTATTTCCTTTGGTCTCGGAGCTGGTTTCTGAACTTTCCAGTGGGATTTTCATGAAGCAAAGTCAAGTTAGAATTACGGGAGCCAGTGCAGCTAACCAGCGACCTGATAAAACTGTTGTCCTTATAGAATTGGTGCCACTTGGGGAAAAGTTCGATAATACTACCGCCTTTCTGACTTCTGAAAGGTTTTGGCATAAAAAGGTTGTTATTAAAGCCTCCTACTTTGGATACTATGATGTTTTATATGTGAACTATCCAGGTTTACCTCCTTCTCCTCCTTTACCACCTTCAAGCATTAGCATGATAGATGGTGGTCCTTATTCCTCTGATGGCAATAATGGAAGGACAATAAAGCCCATTGGAGTTGACATACAGAAGAGACAGAATAGAGGCAATCTTAGCAAAGGCTTTATTGCTATTGTTGCTGTTTCAGTTTTTGTAGCATTTGTTTTATGTACTGCTGCTGCCTATGTCATGTTCAAATTCAGAGTTCATGTTAGTCAAACAACATCGACTCCACGACTTTCACATCCTTCTATTGCCAAAGCATCAGTTACTGCTACTGGATCATTAATTGGAGACAGAGGGATTGGTTCGGTTTCCTCTTTATTTGAATCTAGCATTGCTGCTTATACAGTGTGTGCTAAAACTTTCAGTATGAATGACATTGAAAAAGCTACTGATAATTTTGATGCTTCAAGAATACTTGGAGAAGGTGGTTTTGGTCTTGTTTACAGTGGTGTCCTCGGAGATGGAACAAAAGTGGCAGTCAAGGTTTTAAAAAGGAGGGAGGATCATCAAGGTGATCGCGAATTTTTAGCTGAAGTTGAGATGCTTAGTCGTCTTCACCATAGAAATCTGGTCAGGTTGATTGGTATATGTGCTGAAGAGGACAGCTTCCGCTGCTTGGTTTATGATCTCATTCCAAATGGCAGCTTGGAGTCTCATTTACATGGGGTTGACAGGGAAAAGTGCACACTTGATTGGGGTGCTAGGATGAAGATAGCTCTCGGTGCAGCTCGTGGTTTAGCTTATCTGCATGAAGATTCAAGTCCTTGTGTTATACATAGGGACTTCAAGTCTAGCAACATATTGTTGGAAGATGATTTTAGTCCAAAAGTATCTGATTTTGGATTGGCCTGGACCGCTACAGATGAGGAAAATAGACACATATCAACGCGTGTCGTGGGAACTTTTGGTTATGTGGCTCCGGAGTATGCAATGACAGGTCATCTTCTTGTTAAGAGTGATGTTTACAGCTATGGTGTTGTTCTTCTAGAGCTTTTGACAGGAAGAAAACCTATAGACATGTCACAAGCTCCAGGTCAAGAGAATCTCGTTGCTTGGGCTCGTCCATTCACAAGTAAAGAAGGATTAGAAGAAATTATAGATCCATCTATAGGACTCGATGTGACTTTCGATAGTGTGGCAAAAGTAGCAGCCATTGCTTCAATGTGTGTGCAATCAGAAGTATCGAACCGTCCATTTATGAGTGAAGTTGTTCAGGCTTTAAAACTTGTATGCAATGAATGTGAAGAAGCAAAAGAAGTTGATGGTTCAAGAAGTTCCAGCCAAGAGCATGAGGATTTATTTGTTGATGATATTGAAAGAGGCTTATCAGCATCAGAATTTTTCAATTCACCAAGTAGAGTTGGAAGAATGGAATATGAAACATTTAGAAGAAAGTCTTATTCAGGTCCTATGGGAAATGGAAGAAGCAAACAGTTATGGGAGATAATGAGAAGGCTTTCTGGTGGCAGTGTCAGTGATTGTGAACATGAAACTATATGA 2526 0.4121 MDMVLALMLQLLKFCIIFGFAVASKGLVISPSPENLHVYPSPIETPGSSHQKDSHSTISPSSPTIHNGPFSHPQIALSPPSVKASPPPRKAPVVRPPVSTPTAPASISSPISTPSRIINPGNGRAPIAAPFYKTPKPFPHVIHSPALTPSASNYKHHHSRHIITIPAPASSYMVSPTISRPRDREISPSLSPATGRKRHHFPLPFNSDCLSTVCTEPYVTSPLGAPCRCVWPIHVGLRLSVSLYTLFPLVSELVSELSSGIFMKQSQVRITGASAANQRPDKTVVLIELVPLGEKFDNTTAFLTSERFWHKKVVIKASYFGYYDVLYVNYPGLPPSPPLPPSSISMIDGGPYSSDGNNGRTIKPIGVDIQKRQNRGNLSKGFIAIVAVSVFVAFVLCTAAAYVMFKFRVHVSQTTSTPRLSHPSIAKASVTATGSLIGDRGIGSVSSLFESSIAAYTVCAKTFSMNDIEKATDNFDASRILGEGGFGLVYSGVLGDGTKVAVKVLKRREDHQGDREFLAEVEMLSRLHHRNLVRLIGICAEEDSFRCLVYDLIPNGSLESHLHGVDREKCTLDWGARMKIALGAARGLAYLHEDSSPCVIHRDFKSSNILLEDDFSPKVSDFGLAWTATDEENRHISTRVVGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPIDMSQAPGQENLVAWARPFTSKEGLEEIIDPSIGLDVTFDSVAKVAAIASMCVQSEVSNRPFMSEVVQALKLVCNECEEAKEVDGSRSSSQEHEDLFVDDIERGLSASEFFNSPSRVGRMEYETFRRKSYSGPMGNGRSKQLWEIMRRLSGGSVSDCEHETI 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g05202 841 MobiDBLite consensus disorder prediction 40 119 - -
Trre15g05202 841 Gene3D Transferase(Phosphotransferase) domain 1 553 774 - -
Trre15g05202 841 SUPERFAMILY Protein kinase-like (PK-like) 456 749 IPR011009 -
Trre15g05202 841 ProSiteProfiles Protein kinase domain profile. 475 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g05202 841 CDD STKc_IRAK 481 750 - -
Trre15g05202 841 ProSitePatterns Serine/Threonine protein kinases active-site signature. 599 611 IPR008271 GO:0004672|GO:0006468
Trre15g05202 841 ProSitePatterns Protein kinases ATP-binding region signature. 481 503 IPR017441 GO:0005524
Trre15g05202 841 Gene3D Phosphorylase Kinase; domain 1 449 552 - -
Trre15g05202 841 FunFam receptor-like serine/threonine-protein kinase ALE2 447 552 - -
Trre15g05202 841 FunFam Receptor-like serine/threonine-protein kinase ALE2 553 771 - -
Trre15g05202 841 MobiDBLite consensus disorder prediction 80 99 - -
Trre15g05202 841 MobiDBLite consensus disorder prediction 42 71 - -
Trre15g05202 841 PANTHER OS01G0750732 PROTEIN 204 776 - -
Trre15g05202 841 Pfam Protein tyrosine and serine/threonine kinase 478 749 IPR001245 GO:0004672|GO:0006468
Trre15g05202 841 MobiDBLite consensus disorder prediction 101 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g05202 Trre-Chr15 61497201 61501620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g05202 206 840 Receptor kinase-like Gene Family AT5G56890 61.411 0.0 774
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Trre15g05202 PK_Tyr_Ser-Thr 4.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g05202 - - psat:127138624 1103.97