Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g05170 ATGTTTTTGTTGCATTTGACAGTAAGGTCCCAACTGACAACAGATTTCTATAAGTCATCATGTCCTAACCTTACCAAAATTGTAAGGAAAGAGGTTATAAAGGCTCTAATTAATGAGCAGCGAATGGGCGCTTCTTTGATTCGTCTTCACTTTCATGATTGCTTTGTCAATGGTTGTGATGGATCAATATTATTAGATGGTGGTGATGATTTTGAAAAATCTGCTTTTCCTAATATAAACTCTGTTAGAGGATTTGATGTTATTGATACAATCAAAACTTCAGTGGAAAGTGCCTGTAGTGGAGTTGTCTCATGTGCTGATATAGTAGCCATAGCTGCCAGAGATTCTGTTCTTCTTAGTGGTGGTCCTTCATGGAGTGTTCTTCTAGGACGAAGAGATGGAACAATCTCAAATGGATCACTGGCAAATGTGGCGCTTCCTTCTCCATTTGATCCACTAGATACTATTGTTTCAAAGTTTACTGATGCAGGACTCAATCTCACAGATGTTGTTTCTTTATCAGGTGCTCATACAATTGGGAGAGCAAGGTGTGCACTATTTAGCAACAGATTGTTCAATTTTTCTGGAACAGGTTCGCCAGACAGTACACTAGACACTACCATGCTAACCGACCTACAAAATTTATGTCCTCAAACTGCAGATGGAAACACAACTGCTGTTCTTGATAGAAACTCATCTGATTTATTTGACAATCATTACTATAAGAACTTGCTCAATGGAAAAGGTCTTCTTAGTTCTGATCAGATTTTGTTTTCTACTGATGAAGCCAATTCTACTTCTAAGCCTATAGTTCAAAGCTATATTGATAATAGTTCACTTTTCTTTGGTGATTTTGTGAAATCTATGATCAAGATGGGGAATATAAATCCAAAGACTGGGACTGTTGGTGAGATTAGGAAGAACTGCAGAGTGATAAATTCTTAG 945 0.3735 MFLLHLTVRSQLTTDFYKSSCPNLTKIVRKEVIKALINEQRMGASLIRLHFHDCFVNGCDGSILLDGGDDFEKSAFPNINSVRGFDVIDTIKTSVESACSGVVSCADIVAIAARDSVLLSGGPSWSVLLGRRDGTISNGSLANVALPSPFDPLDTIVSKFTDAGLNLTDVVSLSGAHTIGRARCALFSNRLFNFSGTGSPDSTLDTTMLTDLQNLCPQTADGNTTAVLDRNSSDLFDNHYYKNLLNGKGLLSSDQILFSTDEANSTSKPIVQSYIDNSSLFFGDFVKSMIKMGNINPKTGTVGEIRKNCRVINS 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g05170 314 FunFam Peroxidase 15 149 - -
Trre15g05170 314 CDD secretory_peroxidase 11 312 IPR033905 GO:0004601|GO:0042744
Trre15g05170 314 SUPERFAMILY Heme-dependent peroxidases 11 313 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre15g05170 314 Pfam Peroxidase 28 274 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre15g05170 314 ProSitePatterns Peroxidases active site signature. 43 54 IPR019794 GO:0004601
Trre15g05170 314 PANTHER PEROXIDASE 72-RELATED 5 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g05170 314 Gene3D Peroxidase, domain 2 147 292 - -
Trre15g05170 314 Gene3D - 16 313 - -
Trre15g05170 314 FunFam Peroxidase 147 292 - -
Trre15g05170 314 ProSiteProfiles Plant heme peroxidase family profile. 11 313 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre15g05170 314 PRINTS Haem peroxidase superfamily signature 103 120 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre15g05170 314 PRINTS Haem peroxidase superfamily signature 121 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre15g05170 314 PRINTS Haem peroxidase superfamily signature 43 57 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre15g05170 314 PRINTS Haem peroxidase superfamily signature 229 244 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre15g05170 314 PRINTS Haem peroxidase superfamily signature 169 184 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre15g05170 314 PRINTS Plant peroxidase signature 102 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g05170 314 PRINTS Plant peroxidase signature 243 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g05170 314 PRINTS Plant peroxidase signature 121 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g05170 314 PRINTS Plant peroxidase signature 287 300 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g05170 314 PRINTS Plant peroxidase signature 83 96 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g05170 314 PRINTS Plant peroxidase signature 21 40 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g05170 314 PRINTS Plant peroxidase signature 227 242 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g05170 314 PRINTS Plant peroxidase signature 45 65 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g05170 314 PRINTS Plant peroxidase signature 168 180 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g05170 314 ProSitePatterns Peroxidases proximal heme-ligand signature. 169 179 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g05170 Trre-Chr15 61254871 61256451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g05170 8 313 Peroxidase AT5G19890 64.379 4.51e-144 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g05170 K00430 - gmx:100787073 525.398