Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g05123 ATGTCCTTGGCGACAAAAAAGACTTACATAGTTCACATGAAACACAACAACCACAATGCATTGTCCATGTACTCTTCCATCCTCCAATCTTCTGATTCTGATTCTGATTCACTACTATATACATATGCTAATTCTTACAATGGTTTCGCTGTTTCCCTTGACAATGAACAAGCGCAAAAACTGCGAAGTTCTGATTCAGTTCTTGGTGTATACGAAGATACACTGTACTCGCTGCACACAACCAGAACCCCAGAGTTTTTGGGTCTTCTTCAAATTCAGACCCATTCTCAGTATCTTCATCAACCTTCCTACGACGTCGTTATTGGTGTTCTTGATACTGGCGTATGGCCAGAATCACAGAGTTTCCATGATTCTCAAATGCCCCAAATCCCAACAAGATGGCGTGGAAAGTGTGAATCAGCACCAGATTTCGATCCTTCACTCTGTAACAAAAAGCTTATCGGTGCTCGAAGCTTCTCCAAGGGCTATCTAATGGGTTCGACAGGAGGTGGTAGAAGAAAAGCTACTGAGACTATTTCACCTCGTGACAGAGATGGCCATGGTACTCACACTGCTACAACCGCCGCTGGCTCCGCCGTAGCCAACGCTACTCTTCTCGGTTACGCTACTGGAACTGCACGTGGTATGGCTCCTCAGGCGCGAATCGCCGTTTACAAGGTTTGCTGGACTGGCGGTTGCTATGCTTCCGACATACTCGCCGGAATAGATCAAGCAATTCAAGATGGCGTTGATGTGTTATCGCTATCTCTCGGTGGTTCATCTTCCACTCCTTACTACTTCGACACAGTCGCAATCGGAGCTTTCGCTGCGGTGGAGAGAGGAATATTCGTTTCGTGTTCGGCGGGGAATACCGGACCTCGCAGTGGTTCCTTGTCGAATGTGGCTCCGTGGCTCATGACCGTCGGAGCAGGGACGCTGGATCGGGATTTTCCGGCTTACGCTATGCTCGGAAACGGAAAACGCTTCTCTGGTGTTTCACTTTACAGTGGAGAAGGAATGGGAAACGAACCGGTTGGTTTGGTTTATTTTAACGAACGGTTCAACTCATCAAGTAGCATATGTATGCCCGGTTCACTTGACCCAGAAATCGTGCGCGGGAAAGTGGTTGTTTGTGATAGAGGTGTTAACTCACGTGTTGAGAAAGGCACAGTGGTGAGCGACGCCGGAGGAGTTGGGATGATTCTTTCTAACACGGCGTCGAGCGGTGAGGGATTGGTGGCTGACAGTCACTTGGTACCCGCCGTAGCAGTTGGAAAAACCGAGGGAGATGAGATAAAAGAATATGCATCGTTAGATCGTAATCCAACGGCTGTCCTTAGTTTTGGTGGAACTGTTTTGAACGTGAAACCTTCGCCCGTGATAGCATCTTTCAGCTCTCGTGGGCCCAATGGTGTGACCCCACAGATTCTAAAACCAGATATTATTGGGCCTGGCGTAAACATCTTAGCGGGCTGGACTGGTGCTGTTGGGCCTTCTGGCTCACAAGACACTCGCAAAACCCAATTCAATATCATGTCTGGTACGTCAATGTCATGTCCACACATAAGTGGAGTAGCTGCATTATTGAAAGCGGTTCATCCGGATTGGAGTCCAAGTGCAATCAAATCAGCTCTCATGACAACAGCTTATACCCTTGACAACACTGAATCTCCCCTAAGGGATGCAATGGGAGAGGACTTATCCACACCATGGGCTTATGGATCAGGTCATGTCAACCCACAAAAGGCCCTATCTCCTGGGCTTGTCTATGATGTTGACACCGACGATTACATTGCATTTTTGTGTTCCTTAAATTACACACTTGACCATGTGAAACACATTGTCAAGCGTCCTAATGTTAATTGTTCTACTTCTTTGTCTGACCCTGGTGATCTTAATTATCCATCATTTTCTATTGTTTTTGGTAAAAATGGTAGTGTTGTTCAATACACGCGTACACTCAGTAATGTTGGGGAGTCTGGATCGGTTTATGAAGTGGCCGTGAGTGGGCCATCGACAGTAGGGATAACGGTGAACCCTACCAAGCTTGTATTTGAACAAGTTGGAGAAAGGCAAACATATATGGTCAAGTTTGTTTCCAACAGAGATTCTGTTGATGATTCAATTACGTATGATTTTGGCAGTATTACGTGGAGCAATGAACGACACCAAGTTAGGAGCCCAATTGCTTTTACATGGACCAATTTATGA 2211 0.464 MSLATKKTYIVHMKHNNHNALSMYSSILQSSDSDSDSLLYTYANSYNGFAVSLDNEQAQKLRSSDSVLGVYEDTLYSLHTTRTPEFLGLLQIQTHSQYLHQPSYDVVIGVLDTGVWPESQSFHDSQMPQIPTRWRGKCESAPDFDPSLCNKKLIGARSFSKGYLMGSTGGGRRKATETISPRDRDGHGTHTATTAAGSAVANATLLGYATGTARGMAPQARIAVYKVCWTGGCYASDILAGIDQAIQDGVDVLSLSLGGSSSTPYYFDTVAIGAFAAVERGIFVSCSAGNTGPRSGSLSNVAPWLMTVGAGTLDRDFPAYAMLGNGKRFSGVSLYSGEGMGNEPVGLVYFNERFNSSSSICMPGSLDPEIVRGKVVVCDRGVNSRVEKGTVVSDAGGVGMILSNTASSGEGLVADSHLVPAVAVGKTEGDEIKEYASLDRNPTAVLSFGGTVLNVKPSPVIASFSSRGPNGVTPQILKPDIIGPGVNILAGWTGAVGPSGSQDTRKTQFNIMSGTSMSCPHISGVAALLKAVHPDWSPSAIKSALMTTAYTLDNTESPLRDAMGEDLSTPWAYGSGHVNPQKALSPGLVYDVDTDDYIAFLCSLNYTLDHVKHIVKRPNVNCSTSLSDPGDLNYPSFSIVFGKNGSVVQYTRTLSNVGESGSVYEVAVSGPSTVGITVNPTKLVFEQVGERQTYMVKFVSNRDSVDDSITYDFGSITWSNERHQVRSPIAFTWTNL 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g05123 736 ProSiteProfiles Serine proteases, subtilase domain profile. 84 584 - -
Trre15g05123 736 Pfam PA domain 369 432 IPR003137 -
Trre15g05123 736 Gene3D - 314 453 - -
Trre15g05123 736 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 9 730 IPR045051 -
Trre15g05123 736 CDD Peptidases_S8_3 76 550 IPR034197 -
Trre15g05123 736 ProSitePatterns Serine proteases, subtilase family, serine active site. 514 524 IPR023828 -
Trre15g05123 736 Pfam Fibronectin type-III domain 631 730 IPR041469 -
Trre15g05123 736 Gene3D - 601 733 - -
Trre15g05123 736 FunFam Subtilisin-like protease SBT1.5 105 325 - -
Trre15g05123 736 SUPERFAMILY Subtilisin-like 78 588 IPR036852 GO:0004252|GO:0006508
Trre15g05123 736 Pfam Peptidase inhibitor I9 8 79 IPR010259 -
Trre15g05123 736 FunFam subtilisin-like protease SBT1.5 314 453 - -
Trre15g05123 736 Gene3D Peptidase S8/S53 domain 105 597 IPR036852 GO:0004252|GO:0006508
Trre15g05123 736 FunFam Subtilisin-like protease SBT1.5 601 734 - -
Trre15g05123 736 SUPERFAMILY Protease propeptides/inhibitors 7 77 - -
Trre15g05123 736 PRINTS Subtilisin serine protease family (S8) signature 183 196 IPR015500 -
Trre15g05123 736 PRINTS Subtilisin serine protease family (S8) signature 513 529 IPR015500 -
Trre15g05123 736 PRINTS Subtilisin serine protease family (S8) signature 103 122 IPR015500 -
Trre15g05123 736 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 79 IPR037045 -
Trre15g05123 736 Pfam Subtilase family 105 556 IPR000209 GO:0006508|GO:0008236
Trre15g05123 736 CDD PA_subtilisin_like 323 444 - -
Trre15g05123 736 MobiDBLite consensus disorder prediction 167 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g05123 Trre-Chr15 60905306 60907657 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g05123 6 736 Subtilisin-like Serine Gene Family AT2G05920 64.898 0.0 967
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g05123 - - gmx:100786523 1131.7