Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g05098 ATGCAAACACTAACACTCTTTCTCTTGTTTATCTCACCATTATTTCTTCCATTCTCAACCGCGGCCGGAAAAACACCGCAAGATCTCCTCCGTTCATCATGTGCACAAGCAAGATACCCAACACTTTGTGTCCAAACACTCACAAACCAAGTAACTCCCACCACAAAACCATTAGACCTAGCTCAAGCCGCCGTAAAAGCGAGTCTCACTCGCACACTAACTCTTTCAGTTTACCTCAAAAACACCCTAAAATCACAGGCGAAACCGGCGGTGGAGTCCACCGCCAGTAACAGAAAACGAGTTGCCCTAAATGACTGTGTTGCTCAGATTACCGACTCGGTTTCTGAGTTAACCCAGACGTTAAACGAGTTAAAGCATCTTCGCATGGGAACTTTTGAGTGGCAAATAAGTAATGCTCAAACATGGGCTAGTACTGCTATAACAAATGGTAACTTATGTGTTAATGGTTTGAATAGGAAAGGTGCTGAAGAGAAGGTGAAAATGGAAGTGAAACGTAGGGTTAAGGATGTTTCTATGTTTACTAGTAATGCTCTTTACTTTATCAGTCGACTTGGTGAAAGTAGGAATCCAAAATCTCACTCAAAATCCAAGAACTGA 618 0.4239 MQTLTLFLLFISPLFLPFSTAAGKTPQDLLRSSCAQARYPTLCVQTLTNQVTPTTKPLDLAQAAVKASLTRTLTLSVYLKNTLKSQAKPAVESTASNRKRVALNDCVAQITDSVSELTQTLNELKHLRMGTFEWQISNAQTWASTAITNGNLCVNGLNRKGAEEKVKMEVKRRVKDVSMFTSNALYFISRLGESRNPKSHSKSKN 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g05098 205 Coils Coil 107 127 - -
Trre15g05098 205 PANTHER PECTINESTERASE INHIBITOR-LIKE 6 185 - -
Trre15g05098 205 CDD PMEI-like_3 32 191 - -
Trre15g05098 205 NCBIfam pectinesterase inhibitor domain 3 190 IPR006501 GO:0004857
Trre15g05098 205 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 192 IPR035513 -
Trre15g05098 205 SMART PMEI_2 25 187 IPR006501 GO:0004857
Trre15g05098 205 Pfam Plant invertase/pectin methylesterase inhibitor 29 185 IPR006501 GO:0004857
Trre15g05098 205 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 27 191 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g05098 Trre-Chr15 60713132 60713749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g05098 29 191 Carbohydrate Esterase AT3G14310 29.697 2.36e-13 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g05098 - - mtr:25494163 275.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g05098 15 60713132 60713749 Trre15g05098 15 60713132 60713749 ECH