Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g05092 ATGGTTCATGTTGAAACCGGAGCAAAATTATTGGCTACACTAACACTACTCTCTCTCTTCCACCTTATTATCCCACTAATTCCAACATTTTCCGAATCAAACCTTCACCATGATATGAACTTATTAGATGAGCATTTAAAAGCCGCCGAGGTCGGCGCCGTTAGAGTGGTGAGAGTTAGGAAAGACGGAACCGGAGATTTTAAGACGATAACGGACGCCGTCAACAGCATTCCGTCAGGGAACATGAGGCGAGTGGTGGTTTGGATTGGTATGGGGGAATATAGAGAGAAGATAACGGTTGATATGTCTAAACGTTTTGTAACGTTTTATGGGGAAAGGAATGGGAATGAAAATGACTTAATGCCTATTATAACGTACGACGCAACCGCTTTACATTATGGGACACTTGATAGTGCAACCGTCGCTGTTGATGCTGATTACTTTGTCGCTGTCAATGTTGCTTTTGTGAACTCGTCTCCTATGCCGGATGAAAATAGTGTTGGAGGACAAGCGTTAGCGATGAGGATATCGGGGGACAAGGCTGCATTCTACAATTGCAAGTTTATTGGATTTCAAGATACTTTGTGTGATGACAAAGGCAAACATTTTTTTAAGGATTGCTATATTCAAGGAACCTACGATTTCATCTTTGGAAATGGAAAATCCATTTACTTGAGAACAACCATAGAATCGGTTGCAAAGGGTTTGAATGTTATAACAGCACAAGGTAGAGAAAGCATATCACAAGACACTGGATTCACTTTTGTGCATTGCAACATAACCGGAAGCGGTCACAGGAACACTTACCTCGGTCGTGGTTGGAGGAGGAGCCCTAGGGTAGTATTTGCCTATACCTTTATGGACTCTAATGTCAATTCCAGAGGATGGTACCACCATGAATCCAACGAGACAATCTATTTTGGAGAATATAAGTGCATTGGACCAGGTGCTGCTTCCTCTGCAAGTAGGTTAAAATATCAAAAGATACTATCTGATGAAGAAGCTAAGCCCTTCTTGAGCATGGCTTATATTCATGGAGAACAGTGGGTTCGCCCACCTCCCAAACTGTAA 1071 0.423 MVHVETGAKLLATLTLLSLFHLIIPLIPTFSESNLHHDMNLLDEHLKAAEVGAVRVVRVRKDGTGDFKTITDAVNSIPSGNMRRVVVWIGMGEYREKITVDMSKRFVTFYGERNGNENDLMPIITYDATALHYGTLDSATVAVDADYFVAVNVAFVNSSPMPDENSVGGQALAMRISGDKAAFYNCKFIGFQDTLCDDKGKHFFKDCYIQGTYDFIFGNGKSIYLRTTIESVAKGLNVITAQGRESISQDTGFTFVHCNITGSGHRNTYLGRGWRRSPRVVFAYTFMDSNVNSRGWYHHESNETIYFGEYKCIGPGAASSASRLKYQKILSDEEAKPFLSMAYIHGEQWVRPPPKL 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g05092 356 FunFam Pectinesterase 52 352 - -
Trre15g05092 356 Pfam Pectinesterase 57 346 IPR000070 GO:0030599|GO:0042545
Trre15g05092 356 Gene3D - 53 353 IPR012334 -
Trre15g05092 356 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 46 351 - -
Trre15g05092 356 SUPERFAMILY Pectin lyase-like 55 352 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g05092 Trre-Chr15 60670680 60672779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g05092 42 356 Carbohydrate Esterase AT5G07410 50.629 8.45e-117 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g05092 K01051 - gmx:100790786 520.005