Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g05086 ATGGCTTCTTCAGAGAATTTTGAATCTTCTCACTCTCCTCACTCTCCTTCTCTCTCTGTTGAAACAATTCCTGCTCCTTCTAATATCTGTATGCAGAAATTTCGGCTTTATGAAACTCGATCGAACTTTTACATGATAGGAAGAGATAAGAGCAGGACATACTGGAGGGTACTAAAGATTGACCGTCTAGATCCTTCCGAGCTAAATGTGCTTGAAGATTCCGCCACATATACAGAAAAGGAATGTTCTGATCTTTTGCGGCGGATACATGAAGGGAACAAGTCCACTGGTGGACTAAAATTTGTTACAACTTGTTATGGAATTGTTGGGTTCATCAAATTTTTGGGGCCTTACTACATGCTACTTATCACAAAAAGGAGGAAAATTGGTTCAATCTGCGGTCATGTAGTATATGCTATCTCAAAGACTGAGATGATTCCGTTACCAAATTCTTCTGTTCGGTCTAATATCATCAATTCTAAAAATGAAAACAGGTACAAGAAGCTTCTATGCACAGTTGACCTTACGAAGGACTTCTTTTTCAGCTACTCATACCATATCATGCGCAGTCTTCAAAGGAACATGTGCGACCCTGAGACAGGCCATGCCCTATACGAGACCATGTTCGTCTGGAATGAATACTTAACTCGAGGAATTAGGAATCACCTCCAGAATACTATTTGGACAGTTGCACTAGTTTATGGCTTCTTTAAACAGGACACACTTGAGATATCTGGACGGGAGTTCATACTGACGCTCATTGCGAGAAGATCACGCCATTATGCTGGCACTAGGTATTTGAGGCGAGGTGTTAATGAGAAGGGCAGAGTAGCAAATGATGTTGAGACCGAACAAATAATCTTTGAGGATGTTCCAGAAGGTCTTCCCATCCCGATTAGCTCTGTCATCCAGAATCGTGGCTCGATCCCTCTTTTCTGGTCACAGGAAACTTCACGTCTAAATATTAAACCAGATATTATCGTGTCAAAGAAGGACCAGAATTATCAAGCTACTAGACTCCACTTTGAAAATCTTGTGAAAAGATACGGAAATCCCATTATAATTTTGAATTTAATAAAGACCCAGGAGAAGAGGCCTCGTGAGGCCATTCTTCGTCAAGAGTTTGTTAATGCCATAGAGTTCATCAACAAAGATTTGTCTGATGAAAACAGGCTTAGGTTCCTTCACTGGGATCTACACAAACATTTTCAAAGCAAAGCTACAAATGTATTGCTACTTCTAGGCAAAGTGGCTGCATATGCATTAGCGTTAACAGGCTTTTTCTACTGCCAAGCGTCATCAACATTGAGACCTGAAGACTGTCTAAAATGGCCGCCTACAGACGATGTTGTTAAGGGAAGCTTTTCATCTACTGTACACGCTGAATATGATAATGAGGATGGTAATGATTTAGAGAGGAAACCAAGCGATGGAATTAATATTTCCGATGAAAATCATTCTGCCAAATCACCCAGGTTGCAAAAGGGAGTGCTCAGGACCAACTGCATAGACTGCTTGGATCGCACAAATGTTGCACAATATGCATACGGGTTGGCAGCTATTGGCCACCAGCTTCACTCTCTGGGAATTATTCAGCACCCAAAAATTGATCTTGATGACCCTGTAGCTAATGATTTGATGCAGTTTTATGAGCGGATGGGTGACACACTTGCACATCAATATGGTGGTTCTGCTGCACACAACAAGATATTCTCTGCGAGGAGGGGCCAATGGAAAGCTGCAACACAGTCTCAGGAGTTTTTTAGAACTCTTCAACGCTATTACAGCAATGCTTGGATGGATGCCGAGAAACAAGATGCAATCAATGTATTCCTGGGACATTTTCAGCCACAAGAGGGTATGCCTGCTCTATGGGAGTTGCGTTCAGATCAGCACTACGATACAGGGAGGCTCGGTGACGATGATGCAAGGTCATTTATCAAAAGATCTTTCTCAGATGGAAACATTCTTCGCGACAGTTCTACACCCATGTCAGCTCCAAATGCCAAGAACGAAAAATTCTCTAACTCAGGTTTACCAGACCGATCAGGTGAAGGGAGCAAGGCCTTTTGTGAGTCATCGCCCGAAATATCTACTTCTGAGGCTGAGAGTGACATTTCATTTTCTAGGTACACTCCCTCAATGCCTCGGAAACAGCTTTTTGCCGACATGCAGAGAGAACGATGTGCTGAGAGTCATCATATTTACTATTCTGAGCAAGGGGATTCCTCCAGCTGCTCCAACTTTGTGGACCTGGATTGGCTATCTTCTTCAGCAAATTCATGTGAAGAAGAGCCATACGAGAGGTTATCAATTACCAACTCCCCAACTGCCGGGCTTTCTTCAGAAAATGTTGTCAATGGAGTTATAGTCGGAGAAACAACTGCGTCCGCTAGTGATTGGGGCAGCACCAGCGTAAAGGAGAGGGATCCAACTGAATCAGCGATATCCTACGCTGATGCACGGTCCAACAATCCAGAGGAATTTCCCGATACTTTCATTGAATGGGTGACTTATGGACAGACACTTTGCCATTGA 2538 0.4295 MASSENFESSHSPHSPSLSVETIPAPSNICMQKFRLYETRSNFYMIGRDKSRTYWRVLKIDRLDPSELNVLEDSATYTEKECSDLLRRIHEGNKSTGGLKFVTTCYGIVGFIKFLGPYYMLLITKRRKIGSICGHVVYAISKTEMIPLPNSSVRSNIINSKNENRYKKLLCTVDLTKDFFFSYSYHIMRSLQRNMCDPETGHALYETMFVWNEYLTRGIRNHLQNTIWTVALVYGFFKQDTLEISGREFILTLIARRSRHYAGTRYLRRGVNEKGRVANDVETEQIIFEDVPEGLPIPISSVIQNRGSIPLFWSQETSRLNIKPDIIVSKKDQNYQATRLHFENLVKRYGNPIIILNLIKTQEKRPREAILRQEFVNAIEFINKDLSDENRLRFLHWDLHKHFQSKATNVLLLLGKVAAYALALTGFFYCQASSTLRPEDCLKWPPTDDVVKGSFSSTVHAEYDNEDGNDLERKPSDGINISDENHSAKSPRLQKGVLRTNCIDCLDRTNVAQYAYGLAAIGHQLHSLGIIQHPKIDLDDPVANDLMQFYERMGDTLAHQYGGSAAHNKIFSARRGQWKAATQSQEFFRTLQRYYSNAWMDAEKQDAINVFLGHFQPQEGMPALWELRSDQHYDTGRLGDDDARSFIKRSFSDGNILRDSSTPMSAPNAKNEKFSNSGLPDRSGEGSKAFCESSPEISTSEAESDISFSRYTPSMPRKQLFADMQRERCAESHHIYYSEQGDSSSCSNFVDLDWLSSSANSCEEEPYERLSITNSPTAGLSSENVVNGVIVGETTASASDWGSTSVKERDPTESAISYADARSNNPEEFPDTFIEWVTYGQTLCH 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g05086 845 MobiDBLite consensus disorder prediction 798 821 - -
Trre15g05086 845 MobiDBLite consensus disorder prediction 657 707 - -
Trre15g05086 845 MobiDBLite consensus disorder prediction 1 20 - -
Trre15g05086 845 MobiDBLite consensus disorder prediction 798 825 - -
Trre15g05086 845 Pfam SacI homology domain 106 403 IPR002013 GO:0016791
Trre15g05086 845 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 17 810 IPR043573 GO:0043813|GO:0046856
Trre15g05086 845 MobiDBLite consensus disorder prediction 657 682 - -
Trre15g05086 845 MobiDBLite consensus disorder prediction 463 480 - -
Trre15g05086 845 MobiDBLite consensus disorder prediction 692 707 - -
Trre15g05086 845 MobiDBLite consensus disorder prediction 462 487 - -
Trre15g05086 845 ProSiteProfiles Sac phosphatase domain profile. 170 563 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g05086 Trre-Chr15 60576848 60584454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g05086 31 845 Acyl Lipid Metabolism Gene Families AT3G43220 62.546 0.0 1008
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g05086 K22913 - gmx:100810079 1437.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g05086 15 60576848 60584454 Trre5g05067 5 52047007 52056793 ECH
Trre15g05086 15 60576848 60584454 Trre15g05086 15 60576848 60584454 ECH