Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g05024 ATGAAAGTGGCTGGAAATGCAACTGGTTCACTTCAGACTACTACTGATGTTGCTGTAGTTCCTGGGAATTTCATTGAGGAGCTATATTTGAAAGATACTCTTTCTGCTTTTAGGGAAGCTGCCGATGCAGCTGCTCGTATACAAACTGCCTTCAGGGAGCACTCTTTCAAGGTGCGGAAGAAAGCAGTTGAATCATCCAATCTTGAGATTGAAGCACATGACATGATCGCTGGAATGAAGATTCAGCATGCATTTCGGAACTTTGAAAGGCGAAAAGAGCTTGCAGCTGCTGCATAA 297 0.4377 MKVAGNATGSLQTTTDVAVVPGNFIEELYLKDTLSAFREAADAAARIQTAFREHSFKVRKKAVESSNLEIEAHDMIAGMKIQHAFRNFERRKELAAAA 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g05024 98 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 14 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g05024 Trre-Chr15 60118719 60119015 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g05024 1 97 CAMTA Transcription Factor Family AT3G16940 47.475 6.51e-14 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g05024 K21596 - sind:105178907 128.642