Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04943 ATGGCTTTGCAGTTAGTAATATTATTGTGTCTAGTAACTTCAGCATTTGCAGCCAAAGTGAATGAAGCCTATGGTGGTGACATTACTGGAAGTCCATTAGGGATTGGCATATATCAATACAGTTGCCCTGAAGCAGAGAATATAATCTTCTCTTGGGTGGAACAAGCTGTCTCTAGTGACCCAAGAATGGCAGCTTCATTGCTTAGGCTTCATTTTCATGATTGCTTTGGTTGTGATGCTTCAGTCTTGCTGGATGACACAGCAAACTTTGTTGGCGAGAAAACTGCTGCTCCAAACGTGAATTCACTTAGAGGATTTGAAGTAATCAATGAAATAAAATCTGAACTAGAACTTGTATGTCCACAAACTGTTTCTTGTGCTGACATACTGGCAGCTGCTGCTCGAGATTCGGTTCTTCTGTCAGGAGGACCAACTTGGGAGGTGCAAATGGGGAGAAAAGATAGTATAACAGCTAGCAAGGAAGGGGCAAATAATAATATTCCAGGCCCAAACTCAACCGTTGATATGCTTGTGGCCAAGTTTGAAAACGTTGGCCTTACACTTCAGGACATGGTTGCCCTCTCAGGTGCGCACACGATCGGAAAAGCCCGCTGCTCAACATTTAGAGCTCGCTTACAAAGTAACGGCGTCTCAGACGGTCCATATGTTAATGCTGAATTTGTTGCATCATTGCAACAATTGTGCTCAGGACAAGATAATAGAAACCGAATTGCACATCTCGACCTGGCCACACCAGCTACATTCGATAACCAATACTATATCAATCTTCTCTCTGGGGAAGGATTGCTTCCATCAGACCAGACTCTGGTGAATGGGAATGATCAAACAAGACAGATTGTCGAAACCTATGTAGAGAACCCGTTTGCTTTCTTTCAGGACTTCAAGAATTCAATGATAAAAATGGGAAGCTTGGGATCAGTCACGCAGAGTAACGGACAGATTCGTAGGGACTGTCGAACTATTAACTAA 990 0.4313 MALQLVILLCLVTSAFAAKVNEAYGGDITGSPLGIGIYQYSCPEAENIIFSWVEQAVSSDPRMAASLLRLHFHDCFGCDASVLLDDTANFVGEKTAAPNVNSLRGFEVINEIKSELELVCPQTVSCADILAAAARDSVLLSGGPTWEVQMGRKDSITASKEGANNNIPGPNSTVDMLVAKFENVGLTLQDMVALSGAHTIGKARCSTFRARLQSNGVSDGPYVNAEFVASLQQLCSGQDNRNRIAHLDLATPATFDNQYYINLLSGEGLLPSDQTLVNGNDQTRQIVETYVENPFAFFQDFKNSMIKMGSLGSVTQSNGQIRRDCRTIN 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04943 329 Gene3D - 38 329 - -
Trre15g04943 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Trre15g04943 329 ProSiteProfiles Plant heme peroxidase family profile. 32 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre15g04943 329 Gene3D Peroxidase, domain 2 168 309 - -
Trre15g04943 329 FunFam Peroxidase 168 308 - -
Trre15g04943 329 FunFam Peroxidase 36 177 - -
Trre15g04943 329 ProSitePatterns Peroxidases active site signature. 64 75 IPR019794 GO:0004601
Trre15g04943 329 CDD secretory_peroxidase 33 326 IPR033905 GO:0004601|GO:0042744
Trre15g04943 329 PANTHER PEROXIDASE 72-RELATED 35 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g04943 329 SUPERFAMILY Heme-dependent peroxidases 33 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre15g04943 329 Pfam Peroxidase 53 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre15g04943 329 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g04943 329 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g04943 329 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g04943 329 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g04943 329 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g04943 329 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g04943 329 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g04943 329 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g04943 329 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g04943 329 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre15g04943 329 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre15g04943 329 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre15g04943 329 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre15g04943 329 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04943 Trre-Chr15 59453084 59454512 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04943 25 329 Peroxidase AT4G16270 62.776 3.78e-137 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04943 K00430 - gmx:100787637 525.013